Scyliorhinus canicula (smaller spotted catshark): 119952932
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Entry
119952932 CDS
T11175
Name
(RefSeq) LOW QUALITY PROTEIN: anti-dorsalizing morphogenic protein
KO
K21283
bone morphogenetic protein 2
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04060
Cytokine-cytokine receptor interaction
scau04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
119952932
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
119952932
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
scau04052
]
119952932
00536 Glycosaminoglycan binding proteins [BR:
scau00536
]
119952932
Cytokines and neuropeptides [BR:
scau04052
]
Cytokines
Transforming growth factors (RSTK binding)
119952932
Glycosaminoglycan binding proteins [BR:
scau00536
]
Heparan sulfate / Heparin
Morphogens
119952932
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
119952932
NCBI-ProteinID:
XP_038632495
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Position
18:100170997..100179027
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AA seq
386 aa
AA seq
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MSISIQALSVMCSSLGASLLLLLVSLGPGCPSSLSRHSQQVRSEALKRLLEVFGMEDAPQ
SXPQAPPAPQYMLDLYNTVADVDGVTKAPDLLLGNTVRSFPDRSRSQQFQFFFNLSSVAK
SETILAAELHLFKLRGRLSQDILYHRQHFYQVSVYQILNRNNTSTAEGHRLLSSRVLAAH
DSTWEVFTITPAVYAWTQDKTSNKGLLVIVQTLTGQQLNNHIVRFATRRDHHASKQPMLV
LFTDDERRGIAASTSSRDVATETPTLPHAKLQNRNTRSLDFQACQRYPLYVDFEDIGWAG
WIISPRGYNAYHCKGVCVFPLGQNMRPTNHATVQSIINALKLANGVASPCCIPDKLFSIN
LLYFDDDENVVLKQYDDMVAGSCGCH
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatatccatccaggctctgagtgtcatgtgctccagtctcggtgcctctctgctg
ctccttcttgtgtccctgggtccgggttgcccctccagtctgtccagacacagccagcag
gttcgctccgaggcactgaagaggctgctggaggtgttcgggatggaagacgcccctcag
tccnccccacaggctccgccagcccctcagtacatgctggacctttacaacacggtggca
gacgtggacggagtgaccaaggctcctgacctgttgctggggaacacggtgcgcagcttc
ccggatagaagccgcagtcagcagttccagttcttcttcaacctgtccagtgtggccaag
agtgagaccatcctggccgccgagcttcacctcttcaaactgcgagggcgtctgtcccag
gacatcctgtaccacaggcagcacttttaccaggtcagtgtctaccagatattgaacagg
aataacacgtctacagcagagggacatcggcttctgtcatcgcgagtactggcagcccat
gacagcacctgggaggtcttcacaatcactccggctgtgtatgcctggacgcaggataaa
acgagcaacaagggcttgctggtcattgtgcaaactctgactgggcagcaactcaacaat
cacattgtccgcttcgccactcggagagaccatcacgctagcaagcagccaatgctggtc
ctcttcacagatgacgagagaagaggaattgccgcctctacttcctcaagagatgtggcc
acagagactccaacactcccccatgcaaaactccagaaccggaacacaagatctttggat
ttccaagcgtgtcagaggtatcctctttatgtagactttgaggacatcggctgggccggt
tggatcatctcccctcgaggttataatgcttaccactgcaaaggagtatgtgtcttccca
ctgggccaaaatatgagacccaccaaccatgccactgtccagtccattatcaatgctctt
aagctagccaatggcgtggcatctccatgctgcatcccagacaagctcttctctattaat
cttctctattttgatgacgatgagaatgtggtgctgaaacagtacgatgacatggttgct
ggcagctgtgggtgccattaa
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