Scyliorhinus canicula (smaller spotted catshark): 119954500
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Entry
119954500 CDS
T11175
Name
(RefSeq) cystathionine beta-synthase-like protein isoform X1
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau00260
Glycine, serine and threonine metabolism
scau00270
Cysteine and methionine metabolism
scau00670
One carbon pool by folate
scau01100
Metabolic pathways
scau01230
Biosynthesis of amino acids
Module
scau_M00035
Methionine degradation
scau_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
119954500
00270 Cysteine and methionine metabolism
119954500
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
119954500
Enzymes [BR:
scau01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
119954500
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Gene cluster
GFIT
Motif
Pfam:
PALP
CBS
Methyltransf_12
RASSF8-10_RA
Motif
Other DBs
NCBI-GeneID:
119954500
NCBI-ProteinID:
XP_038635715
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Position
19:complement(77661440..77719617)
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AA seq
534 aa
AA seq
DB search
MTSERSTEVEDFQMQTKQWRMPDLPSRCTWSLGTPPSKSPHGQDKLKDSPKILPNVLYKI
GNTPLIRINNIAREYGLKCELLAKCEFFSASGSIKDRIALRMIEDAEKQGILKPGDVIIE
PSSGNTGISLGLVAAVKGYHCIIVMPEKMSLEKVDVLKALGVEVVRTPNAANLNSPDSHI
GMAWELQSKIPNSHVFDQYQNAGNPLAHYDITAEEILEQCGGQVDVLVAGAGTGGTLTGI
ARKFKEKCPGCQIVGVDPEGSTMAEPEELNLADKTSYEMEGIGHTFIPTVLDRKVIDKWV
KTNDEESFAMARMLIKKEGLLCGGSSGSAMCAALRVAKELKEGQRCVVILPDSVRNYMSK
FLSDHWMEKKGFLTAECNQESWWGVPINQMNFPPALTVLPTTTCQDIIQILKANGADNAV
VVASNGVILGLVTLGNVMSSVKEDKLQLTDPVSKIIYQQYKKVNLNDNLGKISQTLALNH
FVLIIHEQIHHNGSGECGKKEIVHGVVTFNDLITFITAKEKNNEPNRKKPNLRF
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgacctccgaacggagcactgaagtggaagatttccaaatgcagacaaagcagtggagg
atgccagaccttccatcgcgctgcacctggagtctggggacgccaccatccaaatctcca
cacggccaagacaagttaaaggattcacccaagatcctgcctaatgtcctttataaaatt
ggtaacactcccctcatccgaatcaataatattgcaagggagtatggactcaaatgtgag
ctattggcaaaatgtgagttcttcagtgccagtgggagcattaaagatcgcattgcttta
cggatgattgaagatgctgagaagcaagggattctgaaaccaggagacgtcatcattgaa
ccatcctcgggtaacacaggcattagcctgggattggtggctgctgtgaaaggatatcac
tgtataatcgtcatgccggagaaaatgagcttagagaaggtcgatgtgttgaaagccttg
ggggttgaagtggtgaggacaccaaacgctgcaaacctcaatagccccgactctcacatt
ggaatggcgtgggagctgcagagcaagatcccaaactcacatgtgtttgatcagtatcaa
aatgctggcaatccattagcgcattatgacattacggctgaggaaattctggaacagtgt
ggtggacaagtcgacgttttggtagcaggtgctggaactggtggtaccctaactggcata
gcaaggaaattcaaggaaaaatgtcctggctgtcagatcgttggtgttgaccctgaaggt
tcaaccatggctgaaccagaagagctgaacctcgcagacaagacttcctatgaaatggaa
ggaattggccacacatttatacccacagtactagacagaaaagtgattgacaaatgggtg
aagactaatgatgaagaaagctttgcaatggctcggatgttgatcaaaaaagaaggattg
ctgtgcggtggaagttctggtagtgccatgtgtgcagctttgagagtggcaaaagaactg
aaagaagggcagcgctgtgttgtgatcctcccagactctgtccgaaattacatgtcaaaa
ttcctcagtgaccattggatggaaaagaaaggatttctcacagcagagtgtaatcaagag
agctggtggggtgtaccgatcaatcagatgaactttcccccagctctgacagtccttcca
acaaccacctgccaggacatcatccagattctcaaagcgaatggtgcggacaatgcagtg
gttgttgcttccaatggcgtaatactcggtttagtcactctcgggaatgttatgtcgtca
gttaaagaagataaattgcagcttacagatccagtgtccaaaataatttaccagcagtac
aaaaaggtgaatttaaatgacaaccttggaaaaatatctcagactttggcattgaaccac
tttgtcttaatcattcatgaacaaatacaccataacgggagtggagaatgtggaaagaag
gaaatagttcacggcgtggtaacatttaatgatctgataacctttattacagccaaggaa
aaaaacaatgagccgaacagaaaaaaaccaaacctcagattttaa
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