Scyliorhinus canicula (smaller spotted catshark): 119954813
Help
Entry
119954813 CDS
T11175
Name
(RefSeq) asialoglycoprotein receptor 1-like
KO
K06563
C-type lectin domain family 4 member L/M
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03260
Virion - Human immunodeficiency virus
scau03264
Virion - Flavivirus and Alphavirus
scau03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
scau03273
Virion - Lassa virus and SFTS virus
scau04145
Phagosome
scau04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03260 Virion - Human immunodeficiency virus
119954813
03264 Virion - Flavivirus and Alphavirus
119954813
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
119954813
03273 Virion - Lassa virus and SFTS virus
119954813
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
119954813
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
119954813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119954813
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
scau04054
]
119954813
04515 Cell adhesion molecules [BR:
scau04515
]
119954813
04090 CD molecules [BR:
scau04090
]
119954813
04091 Lectins [BR:
scau04091
]
119954813
Membrane trafficking [BR:
scau04131
]
Endocytosis
Phagocytosis
C-lectin receptors
119954813
Pattern recognition receptors [BR:
scau04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
119954813
Cell adhesion molecules [BR:
scau04515
]
Lectins
Selectins and C-type lectins
119954813
CD molecules [BR:
scau04090
]
Proteins
119954813
Lectins [BR:
scau04091
]
C-Type lectins
Asialoglycoprotein and DC receptors
119954813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
BLOC1_2
HEF_HK
ZapB
Tropomyosin
HALZ
ERM_helical
DivIC
Spc7
FBF1
GAS
FapA
WXG100
ADIP
DUF4446
CENP-F_leu_zip
Crescentin
DUF7801
Prefoldin_2
DUF2959
Myosin_tail_1
KASH_CCD
CCDC113_CCDC96_CC
BRE1
AAA_13
DUF1664
COG3_N
DUF7491
Taxilin
Asd-4
PI3K_P85_iSH2
ATG16
DUF5504
OmpH
TPR_MLP1_2
ATG17_like
AI-2E_transport
Laminin_II
FPP
TACC_C
UL45
OVT1
CALCOCO1
OEP
FUSC
DUF4179
Fez1
APG6_N
DUF4686
IFT57
CEP63
Motif
Other DBs
NCBI-GeneID:
119954813
NCBI-ProteinID:
XP_038636283
LinkDB
All DBs
Position
20:94586012..94616566
Genome browser
AA seq
407 aa
AA seq
DB search
MYTVIDTTCKQQVAIEIHHVTRDIRQLAVSQSRFRHFYKIVAVILLIVCAIVVVILAPTI
LNYKQFNVKYSQLEQSYNHLQTNNSQLEQSYNRLHTNYSQLEQSHNYLHTNYSQLEQSYN
HLHTNYSQLEQSYNHLHTNCSQLEQSHNHLHTNYSQLEQRYNHLHTNYSQLEQSYNHLQT
NNSQLEQSYNHLHTNYSQLEQSYNHLHTNYSQLEQSHNHLHTNYSQLEQRYNHLHTNYSQ
LEEVSVQTLDRVRVLLNAVIDNGISSTCPVGWQEFNKTCYHFSAERGHWHNANSSCIAKN
TTLAIVTSQGQQNFIETHDRDKRWIGLTDLEQVGVYRWVNGDQLVMGFWARDEPNNAGVE
RCVTKGARFDPNKWNNDVCTTVHQWICQITRFDYVARQFGLEVVLNQ
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgtatacagttatcgatacaacctgcaaacagcaggtggcgatagagatccaccatgtg
actcgagacatccggcagttggcagtaagtcaaagccgattccgtcacttctacaaaata
gtggcagtgattctattgatcgtctgcgcgattgtcgtggttattctggctccgactatc
ctgaactataaacaattcaacgttaaatacagccaattggaacaaagctacaatcatcta
caaaccaacaacagccaattggaacaaagctacaatcgtctacacaccaactacagccaa
ttggagcaaagccataattatctacacaccaactacagccaattggaacaaagctacaat
catctacacaccaactacagccaattggagcaaagctacaatcatctacacaccaactgc
agccaattggagcaaagccacaatcatctacacaccaactacagccaattggaacaaagg
tacaaccatctacacaccaactacagccaattggaacaaagctacaatcatctacaaacc
aacaacagccaattggaacaaagctacaatcacctacacaccaactacagccaattggaa
caaagctacaatcatctacacaccaactacagccaattggaacaaagccacaatcatcta
cacaccaactacagccaattggaacaaaggtacaatcatctacacaccaactacagccaa
ttggaggaagtgtctgtccaaacattggatcgcgtgcgtgtgttgttgaacgctgtgatt
gacaacgggatcagcagcacttgccccgttgggtggcaagagttcaacaagacctgctat
cacttctcagcggagagagggcattggcacaatgccaacagttcctgcatcgccaagaat
accactctcgccatagtgaccagccaaggccaacagaacttcatagagactcacgaccgt
gataaacggtggattgggctgactgacctggaacaagttggtgtctaccgctgggtgaat
ggcgatcagttagtgatggggttctgggccagagacgagccgaacaatgctggagtggag
cgatgcgtcacgaagggggcgcgcttcgaccccaacaaatggaacaatgatgtctgcacc
accgttcaccagtggatttgtcaaatcacccgctttgactatgtagcgcggcaatttgga
ctggaagtagtgcttaatcaatag
DBGET
integrated database retrieval system
