Scyliorhinus canicula (smaller spotted catshark): 119954839
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Entry
119954839 CDS
T11175
Symbol
cep290
Name
(RefSeq) centrosomal protein of 290 kDa isoform X1
KO
K16533
centrosomal protein CEP290
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scau03036
]
119954839 (cep290)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
scau03037
]
119954839 (cep290)
Chromosome and associated proteins [BR:
scau03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
119954839 (cep290)
Cilium and associated proteins [BR:
scau03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
119954839 (cep290)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CEP209_CC5
QSregVF
Motif
Other DBs
NCBI-GeneID:
119954839
NCBI-ProteinID:
XP_038636315
LinkDB
All DBs
Position
20:38437832..38627857
Genome browser
AA seq
2873 aa
AA seq
DB search
MAPNLDWDKLMKVDPDSLPSREKLADKLLYSISKVEGNELTAENPEKLVQLFRITQSLMK
MKAQEVELALEEVEKAGEEQAKTENQLKAKVLKLENELEVAQVTAGGRDTRFLREELRQL
ENQLQFKDREVSEMEKELNKEKKMVEQVGIRIKEIENENNKLRREKKGLKRENDQLRQDV
IDYQKQIDSQRETLLNRRGDDTNYRMQLSKKNKELAQYLDEIQNLSEANDKLEAQNKQLR
ENLEESVQEMEKMTDEYNKMKLIVQQTDSAMDEFKREKGQLLLQVQDLTNQLQIVTEEED
PVMLAVNAKIEEWKKVLSAKDKEIFEYREKLQELRTKLVIADFDTDKSSIIALQQITEEL
LIVLQERDNEIKVLVGQIEQYTKEVNSNVQIIEDLKMQLEKESSFPALNQQSKITVLQQK
VRDAEQTTFEAKRMAELAEKDAREKDKELGETLTHLRAYESGVYGLENAVAEIKECKNHI
RIRDHQIEGMTREINKLEMKINDVLDENENFRERLGLEANKVIDLSEFRKTKYLKQQQFQ
AENQILLKEVERLEEERLVLKRQIRRMAQDKGMRAGSGGISAEDLGLEDQLNERINPSKE
SEWSSISNFELKNKDRRNFADAPQETEYYRDVVLMKMSSQISDILQRSVRSSRRESLRQE
DTMTSQRESQFLNYQDATQYYVKKPSVNQLQTNPFEELESPVRSLTTTLVTLPEMPVNNA
AGLLEKADVPTTGSVQSVQVNDSEEPAKSLTMDGDPLDDLLEQLRLELSSLKSQNRQIRR
ELLNKEGAYQTAEFELTKLNRQLMQNEYISRELEKKDKELEQTMTEIAQLKSDLKELRQE
NEQFESGMKDILQAIKNTQAETASNQGEENLKIESLERLVAAIDRKNSTDKRDKNVHFKA
QVDQLTGRNEELRHELKESRKEAGIAGNQLAVATEKITNLESELSLLRQGCNVQFQTLAL
PEGMVPSSIDVINTLNEYLVQLLQEISNKEKEATKLQEGAEDHKRKFAVIRHQQGLLYKE
YQSERESWQKDIQKIEEEKKKLNDLKEQDQVKIEEYNQLLETLQMDPDEIKKKLAGITSK
FTVLRVNESSLTRRYTTLLEMEQHLRKENNKLKNEIIAMETAVGERIGYLQRFKDMASFK
IAALQKALDESVPTSDLERANKQYNELSAKYRDLLQKDNLLVQKTTSLEHLEGENTVLHE
QITALNKELEITKEKLHTLEQAWEQMDKLGGPNAMDKETKAITNSEIVSISKKITMLEMK
ELNERQRAEHALKMYEHVRNTLKQMEERNSELETKFSEVTKINLEAQKVEQNLRDELANS
VSQAVSDADKSHITKLEKSESELKVEVSKLRDIADVAEMQVAALEARQQSREKEVEALRK
QVLDYQAQSDERALIATLHQHIVALQVSEATAVRKLEAFASKLQKMEACNLRLMQRLDEK
DQNLFYARLEGRNKAKHLRQTVQSLRRQFSGALPLAQQEKFSKTMVQLQNDKLNIMQDVK
HSQEERRVAEDKALELQLKLKGLEELIGSLKDAKGAQKVIEWHKKIEDLRLQDLKMNRCI
NKQNEELKYLNSLITEQEHTINNLEDEMVQQNKLHEERQIAWDRRELELQHQLDMYGHQQ
TEVLSAAQKFEEATGSIPDPNKPLPEQLNVALQKIREHVYIILETQATCRILEEKLKEKE
ASLWKSEQNVLSRDQVINELRLRLPATAEREKLMVDLSTRTEDDTESRKALKVAHQTIAN
LQARLDQKEEVLQKYQRLLTRAHQDQEEIAKKHEEDVKVLHLKLDSYADASLNKFKQAAM
ELMKKPSLPVPTSKHLARLAELEQTVSEQDSSLSALVDKLKRANMELEKQKDITQLKMKE
HDTEKANLEEKHATKVKKLHAEVDELRCTQLQMEKELQCLQTELEAQKQANTRAPTTTMK
NLVDRLKGQLALKEKQQKALSKALLDLRAEMTSHAEQQIICQAAQKEGHLNVQQIVDKQT
KELRARIEDLTDQLATTKDNMKACKSKEVTTAAEIENLNGELQKKQRVQNKLQTEKDELE
KENEELKKKLKRLCSSMQTKTDTDDKQTTIDELQKKVKRLECELDKKVATEQMERKVLKE
DKTSKEEIVRWEEGKKWQTRLEGVKNKLKEKEKELEAVTKQMTTLKELYAKADQERAFLQ
KKLKARGITADHVIGVRTMECDREMEDLRRKNTELQDQIASMRQQQALPRDSVVEDLTLK
NRYLHEKLQALEKQLSKSTFPRPLRSMQTSDPCPHVESKGPAAIDGIPEIRTDQNVKMPI
IKKCVKKSRLGLQKSNHVCDEQEYAPSNGSGKIAGLGNDKRFSDATMPSTLKSEDACTES
QAEEPLTASTHDGGNMNGEQRSIEKKTELDQAAEKEKLEQGSDNDLGIDIKKTEVNDSPL
DPTSGEERTSGTSEPGIATGEDPAEDQGVESEKHRIPETQLQTSGIGSDASSQKEQELQR
ENLNLAADNVELRFQLEQANKDLPRLKDQIANLQEMYQFLKKEKVELERKLGNVRGSGRS
GKTVPELEKTIGLMKKVVERVQRENEELKKAPGVISREKQTCLEKENERLKSELEKLKMQ
IGGQLTLRYESKTKGVEKILSENERLRKELKKEGDCAEKLRIAKNNLEIMNEKLSVQLEE
TSKRLSFAESRGPQLEGADSKSWKSIVVTRMYESKIKEMEADITKKNQNLTDLRHLLSES
TANEQKLAKQIGDLEEKIEVLKHFPEEAKTEPGLTRELQLLRLTNDRLEKEKAELLHQLQ
VCRKQTGAAAESSSSRNACDDVLDRKDKLIGELVELQTQLKVSDLEKQQLQEEIKSLKKE
LKNFDPSFFEELEDLKFNYNQEVKRNILLEEQLKKLAEQFGVQVTIPENVSIE
NT seq
8622 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctaatctggattgggataaattaatgaaagttgatccagactctttgccaagt
cgagagaaactggcagataagctgttgtattcaatatccaaggttgaaggaaatgagttg
acagcagagaacccagagaagctggttcagcttttccgcatcactcagtccttaatgaag
atgaaagcacaagaggtagaattggctctggaagaagttgaaaaagctggagaagaacaa
gctaaaacagaaaaccagttgaaagcaaaggttcttaaattagaaaatgaactggaggtg
gctcaagtgactgctggagggcgtgatacccgattcttacgggaggaacttcgtcagcta
gaaaaccagctgcagttcaaggaccgagaggtttctgagatggagaaagagctaaacaag
gaaaagaaaatggttgagcaagtgggaattcggatcaaggagatagaaaatgaaaacaac
aagctaagaagagagaaaaaaggactcaaaagagagaatgatcaactacgccaagatgtt
attgactatcagaaacaaatagattctcaacgggagactctccttaataggcgaggagac
gatacaaactatagaatgcagctctccaaaaagaacaaagagcttgcacaatatttggat
gaaattcagaatttgtctgaagccaatgataaactggaggcacagaataaacagttgcgg
gaaaacctggaagaatctgtgcaagagatggagaagatgactgatgaatataacaaaatg
aaactgattgttcagcaaactgatagtgctatggacgagttcaagcgagaaaaggggcag
ctgttgcttcaggtgcaagatttgactaaccagctccaaatcgtaactgaggaggaagat
cctgtgatgctggcagtgaatgcaaaaattgaggaatggaagaaagtattgtctgcaaag
gataaagaaattttcgagtatcgagaaaaattgcaagaactccgaactaaacttgtaatt
gctgattttgacactgataagagcagtatcattgcccttcaacagatcacagaagaactc
ttaattgttctgcaagaacgtgacaatgaaattaaagttctggtgggtcaaatagaacaa
tataccaaggaagtgaatagtaatgtacaaatcatcgaagacttgaaaatgcagctggag
aaagaatcaagttttccagcacttaatcagcagtccaagatcactgtactccagcagaag
gtgagggatgctgagcagacaacatttgaagcaaagcgaatggctgagctcgcagagaaa
gacgcgagggaaaaagacaaggaactgggagaaacgctgacccatctgagggcatatgaa
tctggtgtatatggactggaaaatgctgttgcagagattaaggaatgcaagaatcatatc
agaattcgagatcatcaaatagaagggatgaccagggagatcaacaagcttgaaatgaaa
ataaatgatgttttggatgaaaacgaaaatttccgggagcgcttaggcctcgaagcaaac
aaagtaattgatctgagtgaatttaggaaaaccaagtacttgaaacaacagcagtttcag
gctgagaaccagattctgctaaaagaggttgaacgcctggaagaagaaagactggtgttg
aagaggcaaattcgccggatggctcaagataaaggcatgcgagcgggttctggaggaatt
tcagcagaggacctgggtttggaggatcagcttaatgaaaggataaatccaagcaaagaa
tcagaatggtcaagtatttcaaactttgagttaaagaacaaggatagaagaaattttgct
gatgctccccaagaaactgagtactatagggatgttgtattaatgaaaatgtccagccag
atttcagatattcttcagagatctgtaagaagttctcggcgcgagtctttgcgtcaggaa
gacactatgacttcccagagagaaagtcagtttcttaactatcaggatgcaacacaatat
tatgtaaagaaaccatctgttaaccagttgcaaacgaatccatttgaagaactagaatct
cccgtcaggtcattgacaaccactttggtaacgttaccagagatgccagtgaataatgca
gcagggttacttgagaaagcagatgtccccacgactggaagtgttcaatcagtgcaggtg
aatgattctgaagagccagccaagagccttaccatggacggtgatccattagacgatctc
ctagaacagttacggctagaattatcaagccttaaatcgcagaatcgtcagatacgcaga
gagttactgaacaaagaaggagcgtaccagactgcagaattcgaactgaccaaactcaac
agacaactaatgcagaatgaatatatttcaagagaactggagaaaaaggacaaagaactg
gaacaaacgatgaccgaaattgctcagctgaagtctgacttaaaagaacttcggcaagag
aatgagcaattcgagagtggcatgaaagatattttgcaagccataaagaatacacaagca
gaaactgcttcaaatcaaggggaagaaaatctgaaaatagaaagtctggagagactagtt
gctgcaatcgacagaaagaattccacagataaacgtgacaaaaatgtccacttcaaagct
caggtagaccagctgacagggagaaatgaggaacttcgacatgagcttaaagagtctcga
aaagaggctggcattgctggcaatcagctggcggtagctactgaaaagattacaaacctt
gaaagtgagttatctctgttgcgtcaaggttgcaatgttcagtttcaaactcttgcactg
ccagaaggaatggtgccctctagtattgatgtcatcaacactcttaatgaatatttagtg
cagctgctacaggaaatctcaaataaggagaaagaagcaacaaaactgcaagagggggct
gaagatcacaaacgcaaatttgcagtaattcggcatcaacaaggattgctgtataaggaa
tatcaaagtgaaagggaatcctggcagaaagatattcaaaaaattgaagaagaaaagaaa
aaacttaatgatttaaaggaacaggatcaagtaaaaattgaagaatacaatcaactgctg
gaaacacttcaaatggatcctgatgaaatcaagaaaaagcttgctgggattactagcaaa
tttactgtgctgcgagttaatgaaagctccctaacgaggcgctacacaaccctgctggaa
atggaacagcacctaaggaaagaaaataacaaactcaagaatgaaataatagccatggag
acagctgttggtgaaagaattggatacctgcagagattcaaggacatggccagttttaaa
attgctgcgttacaaaaagctttggatgaaagtgtacctacatctgatctggaacgagct
aacaagcaatataatgaactctcagctaagtatagggatctgctgcagaaagacaacctg
ttagttcagaaaaccacgagtctggaacatttggagggtgaaaatacagtattacatgaa
cagattactgccttgaacaaggagctggaaattacaaaggaaaagctgcacacattggaa
caagcctgggaacaaatggataaactaggaggtcccaatgccatggataaagaaacaaaa
gcaattaccaatagtgaaattgtgtctatctccaagaagattaccatgcttgaaatgaag
gaactaaatgaacggcaaagagcagaacatgctctgaagatgtacgaacatgtgcgaaac
acgcttaaacaaatggaagaacggaattctgaactagaaacaaagttctcagaagtaacc
aaaataaacctggaggcccagaaggttgaacagaacctgagagacgagttggcaaacagt
gttagccaggcagtgagtgatgcagacaaaagccacattaccaagctggagaaatcagaa
tctgaattaaaagttgaggtgtccaaattaagagatattgcagatgtagcagaaatgcag
gttgctgccttggaagctcggcaacaatctcgggagaaagaagtggaagcactgaggaaa
caggtgctagattaccaggcacagtcggatgagagagctctcattgcaacgctgcatcag
cacattgtcgcgttgcaggtgagtgaagccactgctgttcgcaagctggaggcatttgca
agcaagctgcaaaagatggaggcatgcaacttgcggctgatgcagagactggatgagaag
gatcagaatcttttctatgcccgactagaaggcagaaataaggccaagcatttgcggcaa
actgttcagtccttacgcagacagttcagtggagccctgcctcttgcacagcaggagaag
ttctcaaagactatggtgcaactgcagaatgacaaactgaacataatgcaggacgttaaa
cattcccaagaggagagaagagtggcagaggacaaggcattggaactgcaactgaagctg
aagggactagaggaattaataggatcactaaaggatgcaaaaggagctcaaaaggtaatt
gaatggcacaaaaaaattgaagatcttcgcctccaagatctcaaaatgaatcgatgtata
aacaagcagaatgaagaattaaagtacttaaatagtctaataaccgagcaggaacacacc
ataaacaatctggaagatgagatggttcaacaaaacaagctccatgaagagcggcagata
gcatgggatcgcagagagttagagctacaacatcagttggatatgtacggacatcaacaa
actgaagtactgagcgctgctcaaaagtttgaggaagctactggctccataccggacccc
aacaaacctcttccggagcagctaaatgtggctttgcagaagatcagagagcatgtctac
atcattctcgaaactcaagcaacctgcaggattctagaagagaaacttaaagaaaaggaa
gcatctttgtggaagtcagaacagaatgtgctgtcccgagaccaagttataaatgagctg
agacttcgactgcctgctacagctgagcgagaaaagctgatggtggacctcagcacgagg
acagaggatgacacagaaagcaggaaggccctgaaagtagcacatcagactatcgctaat
ctacaggctaggctagatcagaaggaggaagtcctacaaaagtaccaacgattgctgaca
agagctcaccaggaccaagaagaaattgcaaagaagcatgaggaggacgttaaggttttg
cacctgaaattggattcctacgcagatgcgtcactaaataaatttaaacaagctgcgatg
gagctgatgaaaaaaccatcccttccagttccaacatccaaacatctggcacgcctggca
gagctggaacaaacagtttcagagcaggacagttctctgtcagcacttgtggacaaattg
aagagagcaaacatggaactagagaaacagaaagatattactcagctgaaaatgaaggag
cacgacacagaaaaagcaaatctcgaagagaagcacgctaccaaggtgaagaagctccac
gctgaagtagatgagctgaggtgcacccagctgcagatggagaaagagttgcagtgctta
caaactgagctggaggctcagaaacaagctaatacaagggcacccactactaccatgaag
aatttagtggacaggttaaaaggtcaactggctttgaaagagaagcagcaaaaggctcta
agtaaagcactgttagatcttcgagctgagatgacatcccatgcagaacagcaaattata
tgccaggctgcgcaaaaggagggacacctcaacgttcaacaaattgttgataagcaaacg
aaagaactaagggcgcgtattgaagatctgactgaccaacttgcaacaactaaggacaac
atgaaagcatgtaagagcaaggaagtgaccacagcagccgaaatagagaacttaaatggt
gaacttcagaaaaagcagcgagttcagaacaaactgcaaactgagaaagacgagttggag
aaagagaacgaggaactaaagaaaaaactgaagaggctgtgcagcagcatgcagaccaag
accgacactgacgataaacagaccacaatagatgagctgcaaaaaaaggttaaaagattg
gagtgtgaactagataagaaggtagcaactgagcaaatggagagaaaagttttgaaagaa
gacaagacctcaaaagaggaaatagtgagatgggaagaagggaaaaagtggcagaccaga
ttggaaggcgtgaaaaacaagctgaaagaaaaggagaaggagctggaagctgtgaccaag
cagatgaccactctaaaggagttatatgcaaaagctgatcaggaaagggcatttttacag
aagaaactgaaagctcgtggaattacagctgaccacgtaataggcgtcagaaccatggaa
tgtgacagagagatggaagatttaaggagaaagaatactgagctgcaagatcagattgca
agcatgaggcagcagcaagctttaccacgggattctgtggtggaagatttaactttgaaa
aatcgttacctgcatgaaaagctccaagctttagaaaagcagctgtcaaaaagcacattt
cccagaccattgaggtcaatgcagacttcggatccctgtccgcacgttgaatctaaagga
cctgcagccattgatggtatccctgaaatcaggactgaccaaaatgtaaaaatgccaatc
attaagaagtgtgtgaagaaatcaagattgggtttgcaaaagagtaatcatgtttgcgac
gagcaagaatatgcaccttcaaacgggtctggcaaaattgctggtctaggcaatgataaa
cgtttcagtgatgctacaatgccttcaacgttgaaatcagaggatgcatgtactgaaagc
caggcagaggagcctttgacagcttcgacacatgatggtggtaatatgaatggagaacag
cgctcaatagagaaaaagacagaactggaccaagcagctgaaaaggagaaattggagcaa
ggatctgacaatgacttggggattgacataaaaaaaacagaagtaaatgattctcccttg
gatccaacaagtggtgaggagagaacaagtggcacaagtgagccaggtattgcaacagga
gaagatcccgcagaggatcagggagtggaatcagagaagcacagaatccctgaaacgcaa
cttcagacctctggaattggatccgatgcttcatctcagaaggaacaagaactgcagaga
gagaatctcaatttagctgcagataacgtggaactgcgtttccaactagagcaggctaat
aaagatttgccacgattaaaggatcaaatagctaatttgcaggaaatgtatcaatttctc
aaaaaggagaaagtagaattggaacgaaaacttgggaatgtccgagggtctggacgcagt
ggcaagacggtgcctgaattagaaaaaacgattggcttgatgaagaaggtggtggagcga
gtgcagcgagagaatgaggagctgaaaaaggctccaggagtgatatccagggagaaacag
acctgccttgaaaaggaaaatgaaaggcttaagtcagaactcgagaaattgaagatgcaa
ataggcggtcagctgaccttgcgttacgagtctaaaacgaaaggtgtggaaaagatctta
tctgaaaatgagagattacgaaaggagctcaaaaaggaaggtgactgtgctgaaaaactg
cgaattgctaaaaacaacctggagattatgaatgagaagctaagcgtgcagttggaagag
accagtaaacgattaagctttgcagagagtaggggtccacaacttgaaggtgcagacagc
aaaagctggaagtctattgtagtcacaagaatgtatgagagtaaaataaaggaaatggag
gcagacattacaaaaaagaatcaaaacctcaccgatcttagacacctgctgagcgaatcg
actgctaatgagcaaaaattggcaaaacaaataggagacctggaggaaaagattgaggtc
cttaagcatttccctgaagaagccaagacagagccggggttgaccagagaactccagtta
ctaagattgacaaatgatcgactggaaaaagaaaaagcagagcttctccaccaactgcaa
gtctgcagaaagcaaacaggagcagctgcagaaagcagcagcagcagaaatgcttgtgat
gatgtattagaccgaaaggacaaactgataggtgaactagtggaattgcaaacacaactc
aaggtatcagatctggagaaacaacaactgcaggaagaaataaagagtttgaaaaaggag
ctgaagaactttgacccttctttttttgaagagcttgaggacttgaaattcaactacaat
caggaagtgaaacggaacatccttctggaagaacaactaaagaaattagcagagcagttt
ggtgtccaagtgactatcccagaaaatgtttccattgagtaa
DBGET
integrated database retrieval system
