KEGG   Scyliorhinus canicula (smaller spotted catshark): 119955329
Entry
119955329         CDS       T11175                                 
Name
(RefSeq) C-type lectin domain family 4 member M-like
  KO
K06563  C-type lectin domain family 4 member L/M
Organism
scau  Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03260  Virion - Human immunodeficiency virus
scau03264  Virion - Flavivirus and Alphavirus
scau03265  Virion - Ebolavirus, Lyssavirus and Morbillivirus
scau03273  Virion - Lassa virus and SFTS virus
scau04145  Phagocytosis
scau04517  IgSF CAM signaling
scau04625  C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:scau00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03260 Virion - Human immunodeficiency virus
    119955329
   03264 Virion - Flavivirus and Alphavirus
    119955329
   03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
    119955329
   03273 Virion - Lassa virus and SFTS virus
    119955329
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    119955329
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    119955329
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    119955329
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:scau04131]
    119955329
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:scau04054]
    119955329
   04515 Cell adhesion molecules [BR:scau04515]
    119955329
   04090 CD molecules [BR:scau04090]
    119955329
   04091 Lectins [BR:scau04091]
    119955329
Membrane trafficking [BR:scau04131]
 Endocytosis
  Phagocytosis
   C-lectin receptors
    119955329
Pattern recognition receptors [BR:scau04054]
 Membrane-bound pattern recognition receptors
  C-type lectin receptors
   119955329
Cell adhesion molecules [BR:scau04515]
 Lectins
  Selectins and C-type lectins
   119955329
CD molecules [BR:scau04090]
 Proteins
  119955329
Lectins [BR:scau04091]
 C-Type lectins
  Asialoglycoprotein and DC receptors
   119955329
SSDB
Motif
Pfam: Lectin_C UL45 Chordopox_A33R
Other DBs
NCBI-GeneID: 119955329
NCBI-ProteinID: XP_038637364
LinkDB
Position
20:complement(91254133..91291759)
AA seq 186 aa
MEYGQLEQRLRSPGADRSRMEQVRVQTLARVREMFNAVVADATVIKCPRDWQDFNNTCYR
FSTESGGWHNANRSCVLNNATLAILSSLGQQEYVMNYDREKRWIGLTDLEELGVYRWVNG
DRLVTGYWALGEPNNAGVERCVTKGARFHPNKWNNDVCTTQHRWICQITRFDYAARHFGL
EALLNQ
NT seq 561 nt   +upstreamnt  +downstreamnt
atggaatatggccaattggagcagaggctccgtagtccaggcgccgaccggagccgaatg
gagcaagtgcgtgtccaaacgttggctcgagtccgggagatgttcaacgctgtggttgcc
gatgccaccgtcatcaagtgcccgcgtgactggcaagacttcaacaacacctgctaccgc
ttctccacggagagtggcggttggcacaatgccaacagatcctgcgtgctcaataacgcc
accctcgccatactgtccagcctagggcaacaggaatatgtaatgaattacgatcgtgag
aagcgatggatcgggttgactgacctggaagaacttggtgtctaccgctgggtgaatggc
gatcggttagtgacggggtactgggctctgggggagccgaacaatgctggagtggagcga
tgcgtcaccaagggggcgcgtttccaccccaacaaatggaacaatgatgtctgcaccacc
caacaccgctggatttgccaaatcacccgctttgactatgcggcgcggcatttcggattg
gaagcgctgctcaatcaatag

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