Scyliorhinus canicula (smaller spotted catshark): 119955486
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Entry
119955486 CDS
T11175
Symbol
traf2b
Name
(RefSeq) TNF receptor-associated factor 2
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04010
MAPK signaling pathway
scau04137
Mitophagy - animal
scau04141
Protein processing in endoplasmic reticulum
scau04210
Apoptosis
scau04217
Necroptosis
scau04621
NOD-like receptor signaling pathway
scau04622
RIG-I-like receptor signaling pathway
scau04920
Adipocytokine signaling pathway
scau05132
Salmonella infection
scau05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119955486 (traf2b)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119955486 (traf2b)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
119955486 (traf2b)
09143 Cell growth and death
04210 Apoptosis
119955486 (traf2b)
04217 Necroptosis
119955486 (traf2b)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
119955486 (traf2b)
04622 RIG-I-like receptor signaling pathway
119955486 (traf2b)
09152 Endocrine system
04920 Adipocytokine signaling pathway
119955486 (traf2b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119955486 (traf2b)
09171 Infectious disease: bacterial
05132 Salmonella infection
119955486 (traf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scau03019
]
119955486 (traf2b)
04121 Ubiquitin system [BR:
scau04121
]
119955486 (traf2b)
Enzymes [BR:
scau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119955486 (traf2b)
Messenger RNA biogenesis [BR:
scau03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
119955486 (traf2b)
Ubiquitin system [BR:
scau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
119955486 (traf2b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAF3_RING
zf-C3HC4
zf-C3HC4_5
zf-C3HC4_2
zf-C3HC4_4
Fibin
zf-RING_5
Sina_ZnF
ASRT
zf-RING_UBOX
Cep57_CLD
Motif
Other DBs
NCBI-GeneID:
119955486
NCBI-ProteinID:
XP_038637638
LinkDB
All DBs
Position
21:complement(14356615..14478180)
Genome browser
AA seq
556 aa
AA seq
DB search
MAARSERSPPNSLESQAAGNRTGFPKDILAAKVEGKYLCFECHGILRKPFQAQCGHRYCA
SCLKTIVSAGPQKCAACIEEDIYEESLSLLDASSAFPDNAARRELDNLPAVCNNEGCTWK
GTIKEYEADHEGRCEYLSKPCEACSRMVRQLDLSRHLERECPERNLNCKFCKLLFHHKDI
KAHDEICSKFPLTCEWCGRKKIPREKYSDHIRTCGKVKLLCRFNVIGCELAAEKEKLMDH
ENQCVVDHLQMMLQYVVGIGAAMESLQPLNLQQTSAKVNQLFTSVREMEGTLGPFWSMSP
GHQGSPSPEDLGKLVLLEKLEDVQKRCGTLKHKTETFENIVCVLNREVERASVSMTAYEQ
QHKLDQEKIEVLQTKVRQMERATALKDLAIAELELKFHALEYSTDNGNFIWRISDFNRRR
QDAKSQRSPAIFSPAFYTSKYGYKMCLRVYLNGDGVGRGTHMSLFFVIMRGNYDSLLKWP
FKQKVTLMLMDQTNREHVLDAFRPDISSSSFQRPVSEMNIASGCPLFCPLNKLDSKNNYS
REDCIFIKAIVDLTDL
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaggagtgagaggagcccaccaaactcattagaatctcaagctgcggggaat
cgcactggttttcctaaagatattttggcagctaaagtagaagggaaatacctgtgcttt
gagtgccacgggatcctgaggaaaccattccaagcacaatgtggtcaccgctactgtgcg
tcgtgtttgaagacaattgtcagcgctggcccgcagaaatgtgcagcctgcatcgaagag
gacatttatgaagaatctttgtctcttttggatgccagctcggcattcccggacaacgca
gctcgcagggaactggataatttgcccgcagtttgtaacaatgagggctgcacttggaaa
ggcaccattaaggaatatgaggctgaccacgaagggaggtgtgaatatctgtcgaaaccc
tgtgaagcctgcagcaggatggttcgccagcttgacctttcccggcacctggaacgagag
tgtcctgaaagaaacctgaactgcaaattctgtaaattattatttcatcacaaggacatc
aaggcccacgatgaaatttgttccaaattcccattaacgtgtgaatggtgtggaaggaaa
aaaattccaagagaaaagtactcggatcatattcggacatgtgggaaggtgaagctcctt
tgtcgctttaacgtgattggctgtgaactggctgctgagaaggagaaattaatggaccat
gagaatcagtgtgtagtggaccaccttcagatgatgctccaatacgttgtgggaataggg
gctgcaatggaaagcttgcagcctctgaacctgcagcagaccagtgctaaagtcaaccag
ctattcacatcagttcgggaaatggaggggactcttgggccattttggtcgatgtctccc
ggacaccagggctccccctcccccgaggacctgggaaagttggtcctgttggaaaaattg
gaagatgtgcaaaagcgatgtgggactcttaagcacaaaacggaaacgttcgaaaacatt
gtttgcgttctcaaccgggaagtggagcgagcctctgtgagcatgacagcttacgaacag
caacacaaactggaccaggagaagattgaagtattacaaacaaaggtgcgtcagatggag
cgtgccacggccctgaaggacctggccatagcagaattggagctgaaatttcatgcactc
gagtacagtactgacaatggaaactttatttggagaatatcggattttaataggaggagg
caggatgcgaagtcccagcggtcacccgccatattctccccagctttctacaccagcaaa
tatggatacaagatgtgtctgcgagtctatctgaatggtgatggtgttggccggggaacc
cacatgtccttatttttcgtcattatgaggggaaactacgacagtttactgaagtggcct
ttcaaacaaaaggtaactctcatgttgatggatcagactaaccgtgagcacgtcctcgat
gcgttcagaccagacatcagctcctcgtccttccaaaggccagtcagtgagatgaacatt
gccagtggctgtccactcttctgtccactcaacaaactggacagcaagaataattactca
cgtgaagactgcattttcatcaaagccattgtggatttaactgacctgtaa
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integrated database retrieval system
