Scyliorhinus canicula (smaller spotted catshark): 119956177
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Entry
119956177 CDS
T11175
Symbol
ret
Name
(RefSeq) proto-oncogene tyrosine-protein kinase receptor Ret isoform X1
KO
K05126
proto-oncogene tyrosine-protein kinase Ret [EC:
2.7.10.1
]
Organism
scau
Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04010
MAPK signaling pathway
scau04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119956177 (ret)
04020 Calcium signaling pathway
119956177 (ret)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
scau01001
]
119956177 (ret)
Enzymes [BR:
scau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
119956177 (ret)
Protein kinases [BR:
scau01001
]
Receptor tyrosine kinases (RTK)
RET family
119956177 (ret)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
RET_CRD
RET_CLD1
RET_CLD3
RET_CLD4
Cadherin
Ig_Cad99C_N
Cadherin_FAT4_N
RIO1
Pkinase_fungal
Ig_CLSTN
Haspin_kinase
ABC1
Motif
Other DBs
NCBI-GeneID:
119956177
NCBI-ProteinID:
XP_038639031
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All DBs
Position
22:complement(2378290..2489594)
Genome browser
AA seq
1098 aa
AA seq
DB search
MFSLKGACTLLVLLLNEVVLGLYFPRKTYQTTVYVGQPADTPLLQIYALPDEGDRTAYFG
FCNSLLNGFRQQWFRIDERSGVFYLNKTLEESDLNLLGNMGGPELYKITLHIFAVPKSLQ
KKECKAQVIVIVVNKSPPPCANITAEDLCFGEVDSKVQIIENKHPGTFFQMNSLPNQYQC
QLANISYHLATDGSAPFSINEETSEVRVEKSLDREQRETYEMIVKCTLRTAAQVIQVGRS
LHVTVLDKGDNTPYLRDGNDTAEAFIEFNRKEKTVVAALHVYDTDSTTKYTATVMRNDTW
ITDNFRVKATPLETPASIECPARGTVNRYELILKKNLSISENRSFSLDVLVRDTEYSGPN
NSVMLHFNVSVQPIIIEFTEKTFHFSLNRNAGRSAKIGRICIANCLSFQALNISYTLVPV
IQAEENATQQDKNCSSIVGVLKGAEDIFGFLYLSDAKVLRNSSCSKLHYTIIANESLSKE
EAKATIIVTLEGAHTDRNNDCPKICATNKQRSECEECGGLGTLTGKCQWRQGFEKGISKN
YSTCSPDLSSCPDGYCDVVEKRKSTCPQDCIEWDKVVGGFEPGELGGIKGGFGTCVCYSD
NKCVCQKDDIVELVCDDLCKTIIAAAVLLSFILSVLLSSYFIHRYHKNTPKPPIASAEMT
FRRPAQGYPISYSSNNIRRPSLDSMENQVAVDSFKIPEDPKWEFPRKNLVLGKTLGEGEF
GKVVKATAFRLKGKAGYTTVAVKMLKENASQSELRDLLSEFNLLKQVSHPHIIKLYGACC
QDGPLYLIVEYAKYGSLRSFLRESRKVGPSYLGEGNRNSSYLDNPDERALTMGDLISFAW
QISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVK
WMAIESLFDHIYTSQSDVWSFGILLWEIVTLGGNPYPGIAPERLFNLLKTGYRMEKPENC
SEEMYNLMLRCWKQEPDKRPTFAEISKELEKMMVKSRDYLDLAASTPSDSLLYDDGVAEE
ETPLVDCNNAPLPRSLPSTWIENKLYGISYPCWPEDSPVPITRFDGTNSVFTRYANDSVY
TNWMVPATVVKLMEQCDS
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgttttcactgaagggagcctgcaccttactggttctattgcttaacgaagttgtgctc
ggactctatttccccaggaagacttaccagacgacggtgtatgttggccagccggcagac
acccccctcctccagatctacgctctgcctgacgagggtgaccgcacggcctactttggg
ttctgcaacagtctgttgaatggattccggcagcagtggttcaggattgatgagcgatcc
ggggtgttttacctgaacaagactctggaggagagtgacctcaatctgctgggtaatatg
ggcggacctgaattatataagatcacactgcacatctttgctgttcccaagtcacttcag
aagaaggagtgtaaagcccaggtgatagttattgtggtgaacaaaagcccgcccccctgt
gccaatatcacggcagaagacctctgctttggggaagtggattccaaggttcagattatt
gagaacaagcatccgggcacgttctttcaaatgaactccttgccgaaccagtaccagtgt
caattggcaaacatctcctaccatctcgcaacagatggttccgccccgttcagtatcaac
gaagagacgtcagaggtccgggtggaaaagtcactggacagggagcagagggagacgtac
gaaatgattgtcaaatgcaccttgcggacggctgcccaggtgattcaggttgggaggtcc
ctgcacgtgactgtcctcgacaagggtgataacactccctacctccgtgacggcaacgac
accgccgaggctttcattgagttcaacaggaaagagaaaacggtggtggcggctctccac
gtgtacgacaccgacagcaccacgaagtacacggcgacggtgatgaggaacgacacttgg
attacagacaacttcagggtgaaggctacccctttggagacgcccgccagcattgaatgc
ccagcccgagggacggtaaacagatatgagttgatactgaagaagaacctgtcgatctcc
gagaaccgatcgttcagtttggatgtcctggtccgtgatacagaatacagtggccccaac
aactcagtgatgctccatttcaatgtcagtgtccagcctatcattattgaattcactgag
aaaacattccacttctcgctgaacaggaacgcaggacgttctgcaaagattggaaggatt
tgcatagcaaactgtctcagctttcaagcattgaatataagctacacgctggtgcccgtg
atccaggcggaggagaacgccacacaacaggacaaaaactgctcttccattgtgggggtc
ctcaagggagccgaggatatattcgggtttctgtacctcagtgacgcgaaagtgttgaga
aacagctcttgttccaaactccactacaccatcattgccaatgagtcactgagcaaggag
gaggccaaggccaccattattgtcacgctcgagggcgcacacactgacagaaataatgat
tgtcccaagatctgtgccacaaataagcagcgttccgagtgtgaggaatgtggcggtctt
ggtacgttaactgggaaatgccagtggcgacagggctttgaaaagggtatatcaaaaaac
tactcgacctgctccccggacctctccagctgccctgatggatattgcgatgttgtggag
aagaggaagagtacgtgtcctcaagattgcatcgaatgggacaaggtcgtcggtggattt
gaacctggagagctgggaggaattaaaggaggtttcggaacttgtgtctgctattctgat
aataaatgcgtatgccaaaaggatgacattgttgagctggtttgcgatgatctgtgtaaa
accatcattgcggccgcagtgctgctgtcattcattctgtctgtgctgctctcttcctac
ttcattcaccgataccacaaaaacactcccaaacctcccatagcctcggctgaaatgact
ttcaggagacctgctcagggttatcccatcagctactcctccaataatatccgaagacct
tccttggattccatggaaaatcaagtggcagtggattccttcaagatcccggaggatccg
aagtgggaattcccaaggaagaacctggtccttggtaagacccttggggaaggagaattt
gggaaggtcgtgaaggctacggcattcaggctcaaaggaaaagcaggctataccactgtg
gcagtcaaaatgttaaaagaaaatgcgtctcagagtgagctgcgggacctcttatctgaa
ttcaaccttctgaagcaagtcagccatcctcacattattaaactgtacggagcctgctgc
caggatggtcctctgtatcttatcgtggaatacgccaaatatggatctctgaggagtttc
ctgagggaaagtcgcaaagtcggccccagttacctgggtgagggcaatcgaaattccagt
tacttggacaatccggacgagcgggctctgaccatgggagacttgatatcctttgcctgg
cagatctcccggggaatgcagtacctggctgaaatgaagcttgtccatcgtgacctggcg
gcgcggaacgttctggtcgcagaaggacgcaagatgaagatctccgattttgggctctcc
agggatgtgtacgaggaggattcttacgtaaaaagaagcaagggacggattcctgtcaag
tggatggcaatcgagtccttgtttgatcacatctatacctcacagagtgatgtatggtca
ttcggcattctcctttgggagatagtgacgctgggtggaaatccatatcccggaattgcc
cctgaacgcctcttcaatctcctgaaaacgggataccggatggagaagccagaaaactgc
agtgaagaaatgtacaacttgatgttgcgatgttggaaacaagagccagacaaacggccc
acatttgcagaaatcagcaaagagctggagaaaatgatggtgaagagtcgggactacctg
gatcttgcggcttccaccccgtcagattccctgctctacgatgacggcgtggctgaagaa
gagacgccattggtagactgtaataatgctcccctccctcggtccctcccctccacatgg
attgaaaacaaactctacggcatctcgtacccctgctggcccgaagacagccctgtcccc
atcacgagattcgatggaactaactcagtctttacaagatatgcaaatgatagtgtttat
acaaactggatggtgccagcgacagttgtaaaacttatggagcagtgtgatagttaa
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