KEGG   Scyliorhinus canicula (smaller spotted catshark): 119956509
Entry
119956509         CDS       T11175                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
scau  Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03420  Nucleotide excision repair
scau04110  Cell cycle
scau04114  Oocyte meiosis
scau04120  Ubiquitin mediated proteolysis
scau04141  Protein processing in endoplasmic reticulum
scau04310  Wnt signaling pathway
scau04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:scau00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    119956509
   04120 Ubiquitin mediated proteolysis
    119956509
  09124 Replication and repair
   03420 Nucleotide excision repair
    119956509
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    119956509
   04350 TGF-beta signaling pathway
    119956509
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    119956509
   04114 Oocyte meiosis
    119956509
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:scau04121]
    119956509
   03400 DNA repair and recombination proteins [BR:scau03400]
    119956509
Enzymes [BR:scau01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     119956509
Ubiquitin system [BR:scau04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   119956509
  Multi subunit type E3
   SCF complex
    Ring finger protein
     119956509
   Cul2 complex
     119956509
   Cul3 complex
     119956509
   Cul4 complex
     119956509
   Cul7 complex
     119956509
   Cul8 complex
     119956509
   Cul9 complex
     119956509
DNA repair and recombination proteins [BR:scau03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      119956509
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      119956509
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003 PHD_NSD
Other DBs
NCBI-GeneID: 119956509
NCBI-ProteinID: XP_038639719
LinkDB
Position
23:complement(23701476..23718068)
AA seq 108 aa
MATAMDVDAPSSTNSAGGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcgacggcgatggatgtggacgctccgagttccaccaacagcgccggcggcaaaaag
cgcttcgaggttaaaaagtggaatgcagtcgccctgtgggcctgggacattgtggtagat
aactgcgccatctgccgaaatcacatcatggacctgtgtatagaatgtcaggcaaaccaa
gcttccgcaacttcagaggaatgcactgtcgcatggggggtgtgtaatcatgctttccat
ttccactgcatttcacgttggctgaagactagacaagtttgccctctggacaatagggag
tgggaattccagaagtatggccactga

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