Scyliorhinus canicula (smaller spotted catshark): 119957800
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Entry
119957800 CDS
T11175
Name
(RefSeq) homeobox protein otx5
KO
K09337
cone-rod homeobox protein
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scau03000
]
119957800
Transcription factors [BR:
scau03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
119957800
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
119957800
NCBI-ProteinID:
XP_038641833
LinkDB
All DBs
Position
27:18742313..18773539
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AA seq
290 aa
AA seq
DB search
MMSYIKQPHYAVNGLTLTGPGMDLLHSAVGYQTTPRKQRRERTTFTRAQLDILESLFAKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQSSGQAKARPTKKKTSPTRDTS
SETNGNGHYSPTPPGAAGTPSSISNATVSIWSPASISPIPDPLSSSTASCMQRSAAYPMT
YSQAQGYNQSYTGSSSYFSGLDCGAYLSPMHPQLSAPGAALSPLGTPTMGGHLGQSPVSL
SAQGYSSAGLGFNTVDCLDYKDQSTSWKLNFSASDCLDYKDQTSWKFQVL
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcctatatcaagcaaccccattatgcagtcaacggactgaccctaaccggcccg
ggtatggacctcctacactctgccgttggataccaaacaacgccaaggaaacagcgaagg
gagaggaccacttttacacgggcgcagctcgatatcctagaatctctctttgccaagact
cgttaccccgacatcttcatgcgagaggaggtggctctgaaaatcaatttgcccgaatcc
agagtccaggtttggtttaagaatcgcagagctaaatgtcggcagcagcagcagcagagt
agcgggcaagccaaggcaagaccaaccaagaagaagacctctccaactcgcgacacaagc
tccgagaccaacggtaacggtcattacagcccaactcctccaggggcggccgggactccc
agctccatctccaacgccaccgtctccatctggagcccagcctccatctctcccatcccg
gatccactgagctcgtccacagcctcctgcatgcagaggtcggcggcctaccccatgacc
tacagccaggctcaagggtacaaccagagctacacgggatcatcctcctacttcagcggc
ctcgactgcggcgcctacctatcccccatgcacccccagctgtccgcccccggggccgca
ctcagcccgctggggaccccaacaatgggcggccacctgggccaatccccagtctcgctg
tcagctcagggctacagctctgcaggcctgggcttcaacactgttgactgcctggactac
aaggatcagagcacatcgtggaagctgaatttcagtgcgagcgattgcttggattacaag
gaccaaacctcctggaaatttcaagtcttgtaa
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