Scyliorhinus canicula (smaller spotted catshark): 119958084
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Entry
119958084 CDS
T11175
Name
(RefSeq) beta-1,4 N-acetylgalactosaminyltransferase 1-like
KO
K00725
(N-Acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase [EC:
2.4.1.92
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau00600
Sphingolipid metabolism
scau00604
Glycosphingolipid biosynthesis - ganglio series
scau01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
119958084
09107 Glycan biosynthesis and metabolism
00604 Glycosphingolipid biosynthesis - ganglio series
119958084
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
scau01003
]
119958084
Enzymes [BR:
scau01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.92 (N-acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase
119958084
Glycosyltransferases [BR:
scau01003
]
Glycan extension
Glycolipid
119958084
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Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
FTSW_RODA_SPOVE
Glyco_tranf_2_2
Glyco_tranf_2_5
FKRP_N
Motif
Other DBs
NCBI-GeneID:
119958084
NCBI-ProteinID:
XP_038642239
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All DBs
Position
28:5560941..5710527
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AA seq
518 aa
AA seq
DB search
MAPNGWSRLKSEGQKQPQLEELRGQQLTCKLPLEVRWMRIVKKKACCLGLICLLLVMFIF
YRMQPGYIVDINYKSERMPRDLFGYGLGKPGGQYSHIPHKTKNTVVRRLTRNDCNCEGEE
TLLSSFVGQGSVTQLELVFDAAKRHEVTQRREKEYQHFLQRTRSSADTLLIAKANSPLEY
PIQGVEVRPMKTILIPGQKKPTERLTFVSRLSRDVIESYKLFRCGGVLYIVNTEGGIIER
LLLHQNERWSHTVLCVLGYNISGLVTIATKTFLRYDKLRQLISSIRKYYPSVTIIIADDN
RETQKIEGAFIDQYFMPFQKGWFAGRNLAASQVKTKYLLWVDDDFIFASDTKLEKMVDIL
EKTTLDLVGGSVREITTYSATFLHKLSVEQGGKGGDCLMLHRGHYHQVEGFPNCFVTDAT
INFFMARTEKVQQVGFDPHITRQGHLEFFVDGLGLLHVGSCSDVMIDHASKITMPWRKKS
ESEQMYHRLRYVQGSEVDGSLQNKLFYFKNRFKCIRYG
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggctcccaatgggtggagccgattaaaatcagaggggcaaaagcagccacagttggaa
gaactcagagggcaacagttgacttgcaaattgcccctcgaggtaaggtggatgcgtata
gttaagaagaaggcctgctgcctgggcttgatatgtctgctcctggtaatgttcatcttt
tatcgtatgcagcctggctatattgtggatattaactacaaatctgagaggatgccaaga
gacctatttggatatggattagggaagcctggcgggcaatactcccacataccacacaaa
acgaaaaacactgttgtccgacgactcacaagaaatgactgcaattgtgaaggtgaggag
actttattgagcagcttcgtcggtcaaggctctgtcactcagttggagttggtctttgat
gcagcaaaacgccatgaggtgacccaacggagagaaaaggaatatcagcattttctacaa
aggaccaggtcttctgcggacaccttgcttattgccaaagcgaattctcccttggagtac
ccaattcaaggtgttgaagtgcggcctatgaagaccatcttaataccaggtcagaaaaaa
cccacggaaaggcttacatttgtatcgcgcctctcacgggacgtcatagagagctataag
ttatttcgctgtgggggagttttgtacattgtgaacacggagggcgggattatcgaaagg
ttactcttgcaccaaaacgaaaggtggtcacatactgttctctgtgttttaggctataac
atcagtggtctggtaactatagcaaccaaaacgtttctcaggtatgacaagctgagacaa
ctgatatcaagcattaggaagtattacccctcagtcaccattataatcgcggatgacaac
agagaaacgcaaaagattgaaggagcgtttattgatcaatacttcatgccatttcagaag
ggctggtttgccgggcggaacttggcggcgtctcaggtcaaaacaaaatacctgctgtgg
gtcgacgatgacttcatctttgcctccgacaccaagctggagaaaatggtggacatcctg
gagaaaacaaccctggatttagttggcggctcggtgagagagataacgacttactcggcc
acatttttacataagcttagtgtggaacaaggaggaaaggggggagattgcctcatgctc
cacagaggacattaccatcaggtagaaggtttcccgaactgcttcgttacggacgccaca
atcaacttctttatggccagaacagaaaaggtgcaacaagttggattcgatcctcacatc
acaagacaggggcacttagaatttttcgttgatggcttgggcctactccatgtaggctcc
tgcagtgatgtcatgatagatcacgcctccaaaatcacgatgccctggaggaagaaaagc
gaaagtgagcaaatgtaccaccgattgcggtatgtccagggttcagaggtcgatggcagc
ttacagaacaaactgttctacttcaaaaaccgatttaaatgcatccgatacggctga
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