Scyliorhinus canicula (smaller spotted catshark): 119964222
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Entry
119964222 CDS
T11175
Symbol
dhx9
Name
(RefSeq) ATP-dependent RNA helicase A
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scau03041
]
119964222 (dhx9)
03012 Translation factors [BR:
scau03012
]
119964222 (dhx9)
Enzymes [BR:
scau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
119964222 (dhx9)
5.6.2.6 RNA 3'-5' helicase
119964222 (dhx9)
Spliceosome [BR:
scau03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
119964222 (dhx9)
Translation factors [BR:
scau03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
119964222 (dhx9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
dsrm
DEAD
HA2_N
HA2_C
AAA_19
AAA_22
Dicer_dimer
ATPase
Motif
Other DBs
NCBI-GeneID:
119964222
NCBI-ProteinID:
XP_038649433
LinkDB
All DBs
Position
4:complement(82417688..82511112)
Genome browser
AA seq
1163 aa
AA seq
DB search
MTNSLPHLGMAVSAAFSADENSGGGGGGGGGGGGGFGGYWERGANLKEYYEKRDEQEAQA
TLESEGLDLNAGLHGNWTLENAKAQLNQFFQKEKIQADYKFSQVGPDHNRSFIAEMTIHV
RQLGRKITAREHGSNKKLAAQSCALSLVRQLYHLGVFEAFSGHTKKKETEKVEPYDLNIA
SDLERQLESVVNELGLQLVPPPEDPNDPVSLTVGKLAHFEPSIRQNFAGVVPWSPPQVNW
NPWTSSNIDEGPLAYALPEQISADLQNELQYQVQNDTNLQRILTERSQLPVKNFEDEILK
SVSCSSVIIVRGQTGCGKTTQVPQYILDQYIRSGKGSECNIVVTQPRRISAVSVAERVAC
ERGEDLGKSCGYSVRFESILPRPHGSIMFCTVGVLLRKLEAGLRGISHVIVDEIHERDIN
TDFLLVVLRDVVQAYPDIHVILMSATIDTTMFREYYFDCPIIEVFGRTFPVQEYFLEDGV
QMTRFIPPPRDKKRKDKDEDGGGDDEEVNCNKICGDDYGAETKRAMAEMSEKETPFELIE
ALLKYIETLDVDGAVLVFLPGWNLIFAMQRHLETNSYFGSHRYRVLPLHSQIPREEQRRV
FDPVPPGVRKVILATNIAETSITINDVVYVIDSCKQKMKLFTSHNNMTNYATVWASKTNL
EQRRGRAGRVCPGFCFHLCSRARFERLETHMTPEIFRTPLHEVALSIKLLRLGGIGPFLA
KAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILARLPIEPRLGKMMIMGCIFHVGD
AVCTISAATCFPEPFVNEGKRLGYVHRNFAGTRFSDHVALLSVFQAWDDARMGGEDAEMR
FCDHKRLNMATLRMTWEAKVQLKDILINSGFPEECLITQVFNNTGPDNNLDVVISLLCFG
LYPNVCYHKEKRKILTTEGRNALIHKSSVNCPFSNQDTKYPSPFFVFGEKIRTRAVSAKA
MTLVSPLQLLFYGSKKVTANGEIILMDEWIKLKMPHYTAAAVVALRAGMEALVVEVAKDP
EFIRKLDPSHERLLNVIRQISKPGAAGINLLANSRFGDGPRPPKMARFDSQGFGGRGGAR
GSSYRGGGYGRGNGYGGSSGSYSSGYYRGGSGYRSYQSGGGGGYGGYQRGGYGGYQSGGG
SGGNSGYQSGSGGARFGDRGGNY
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgactaattctctgcctcaccttggcatggcagtctctgccgcattttctgcagatgaa
aattctggcggtggaggaggcggtggaggaggtgggggaggaggattcggtggttattgg
gaacgtggagccaatctaaaggagtattatgagaagagagatgaacaggaagcccaagca
accctggaatctgaaggcttggatttgaatgctggccttcatggcaactggacacttgaa
aatgccaaagctcaacttaaccaattcttccaaaaagagaagattcaagcagattataag
ttttcacaagtgggacctgaccacaacaggagttttattgcagagatgactattcacgtg
agacagcttggaagaaaaatcacagctcgtgaacatggttcaaataagaaactggctgca
cagtcatgtgcactgtcattggttaggcagctttaccatttgggggtgttcgaagctttc
agtgggcacacaaagaaaaaagaaacagaaaaggtggaaccatatgatctaaatattgct
agtgacttggaacgtcagcttgaatctgttgtaaatgagttgggattgcagcttgtacca
ccacccgaagaccctaatgatccagtttcactcactgttggaaagcttgcccatttcgag
ccatcaattcgacagaactttgcaggagttgtaccatggtcacctccacaagtcaactgg
aatccttggactagtagcaatattgatgaagggcctcttgcgtatgcactgccggaacaa
atcagtgcggacctgcagaatgagctacaataccaggtgcagaatgataccaacctgcaa
cgtatactgactgaaagaagccaattaccagtcaaaaattttgaagatgaaatccttaaa
tcagtcagctgcagttcagtaatcattgttcgaggtcaaactgggtgtggtaaaactact
caggtccctcaatacatcctggatcaatacattagaagcggcaaaggttcggagtgtaac
attgtagtcacacagcctcgacgtattagcgctgtgtcagttgcagaacgtgttgcttgt
gaacgtggagaagatctaggcaagagttgtggttacagtgttcgttttgaatccatattg
ccaaggccacatggcagcataatgttctgtactgtaggtgtactgctgaggaaattagaa
gctggccttcgtggtataagccatgtaatagtggatgaaatccatgagagggatattaat
actgattttctccttgtggttttgcgggatgttgtccaagcttatcctgatattcatgtt
attctcatgtctgccactattgacaccaccatgttcagagagtattactttgactgtcca
ataattgaagtatttggaagaacatttcctgttcaagaatatttcttagaagacggggta
cagatgactcggtttattcctcctccgagagacaagaagaggaaggataaagatgaggac
ggtggaggagacgatgaggaggtgaactgtaacaaaatctgtggtgatgactatggggca
gaaaccaaacgtgctatggctgaaatgagtgaaaaagagaccccttttgaactgatagaa
gcattactcaaatacattgaaacattggatgtagatggagcagttcttgttttcttacca
ggctggaacttgattttcgcaatgcaaagacatctggaaacaaactcttactttggaagc
cacagatacagagttttgccgttacattcacagattccaagggaagaacaacgcagagtg
tttgacccagtgccaccaggagtcagaaaggttattttggccaccaacattgcagaaaca
agcattaccattaatgacgtggtttatgtcattgattcgtgcaaacaaaaaatgaaactg
tttacatctcacaacaatatgaccaactatgccacagtgtgggcttcaaagaccaatttg
gaacagcgacggggtagagcaggacgtgtctgtcctggcttctgcttccatctctgtagc
agggcacggtttgagagacttgaaacgcacatgactccagagatatttcgcacacctctt
catgaagttgctctgagcatcaaacttcttcgtctaggtggcattggaccatttttggcc
aaagctattgaacccccaccgctggatgccgtcattgaggcagaacacaccttgcgagaa
cttgatgctttagatgctaatgatgagctgactcccctgggacgcatcttggctagactt
cctattgagccacgccttggcaagatgatgattatgggctgtatattccatgtcggagat
gcagtgtgcaccatatctgctgctacctgttttccagagccttttgttaatgaaggcaag
cgtcttggctatgtgcacagaaactttgcaggaaccagattttcggaccatgtggctctg
ctttccgttttccaggcctgggatgatgcaagaatgggaggcgaagatgcagaaatgcgg
ttttgtgatcataaaaggttaaatatggcaactttgcggatgacgtgggaagctaaggtt
cagctgaaggatatccttatcaattctggctttcctgaagagtgtttgataacacaagta
tttaacaatactggaccagataataacctagatgtggttatctcacttctttgctttggg
ctttatcccaatgtctgctaccacaaggaaaaaagaaagatcttaactacagagggacgc
aatgcacttattcataagtcatctgttaattgtcccttcagcaaccaagatacaaaatat
ccttctccattcttcgtgtttggggaaaaaatacgaacgcgggctgtttctgcaaaggcc
atgactttagttagtccactccaattactcttttatggttcgaagaaggtaactgcaaat
ggagaaattattctgatggatgaatggataaagttgaagatgcctcactatacagcagct
gcagttgttgctttgcgtgcaggaatggaggcactggttgtcgaagttgccaaggatccc
gaattcatacgcaaactggatccttcacatgagcggttgttgaacgtgatccggcagatt
tcaaagcctggggcagcgggcattaatcttctggcaaattcaagatttggggatggtcct
cgtcctcccaaaatggcacgttttgacagccaaggatttggtggaagagggggtgctcgt
ggttccagttacagaggaggtggctatggaagaggcaatggctatggtggctccagtggc
agttacagttctggatactatagaggtggtagtggataccgcagctaccaaagtggagga
ggaggagggtatggaggttaccaaaggggtggatatgggggctaccaaagtggtggggga
agtggaggaaacagtggctaccaaagtggtagtggtggggcaagatttggtgaccgtggt
ggtaactattag
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