Scyliorhinus canicula (smaller spotted catshark): 119964815
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Entry
119964815 CDS
T11175
Symbol
ptprc
Name
(RefSeq) receptor-type tyrosine-protein phosphatase C isoform X1
KO
K06478
receptor-type tyrosine-protein phosphatase C [EC:
3.1.3.48
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04514
Cell adhesion molecules
scau05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119964815 (ptprc)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
119964815 (ptprc)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
scau01009
]
119964815 (ptprc)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
scau04090
]
119964815 (ptprc)
Enzymes [BR:
scau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
119964815 (ptprc)
Protein phosphatases and associated proteins [BR:
scau01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
119964815 (ptprc)
CD molecules [BR:
scau04090
]
Proteins
119964815 (ptprc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
PTP-SAK
Tc-R-P
Y_phosphatase3
DSPc
PTP-NADK
PTPlike_phytase
Motif
Other DBs
NCBI-GeneID:
119964815
NCBI-ProteinID:
XP_038650757
LinkDB
All DBs
Position
4:complement(94202752..94654858)
Genome browser
AA seq
1259 aa
AA seq
DB search
MSKFSWLKYLALAAALLGATVDAQVSPTTVAPTTSSVASTAADHSSLTTSSMAPTTVTTA
FTPGSNHSSRTLTSTASTVTTAPTAGSSLDVHESTLRDSSTAPQSNSTAPAPYVTIPTNS
NTNSTVIPTRSETSAPSEGTAINDTTTGFLNESVTSAPIYTTSNSTTPSGDENCANITAK
RLSVTSNNVTLNISYTITESQNITILNKLILLDENKSSIIESLVGLDDCTNYNLMAIFSG
KCRQQISLANITTGPPPDLQFELTKKQSEGNIIFKLNQQHANCGWKYTWNCTSPEGSNIE
NQENQEIATFYNITPCKDYICSLNIQHNSTNWTQTVTGNITAEYEEPNEPTFELASKEKS
IDVTWNFIVTKQKAVTSVKITCSPEVKYEDRNQEVRSDTVRSGVHTFYNLTPYAKYTVTV
NVSNKCTEGGVLSNWFTKQIETQVGVPKKPESELSLIANNAIKLKCTKLKDKDFHGPEST
YFAKVNEKVQFRKNSEKCEFVFEDLSYLTTYKVELIASNGKYNSSSIDTITTKYNDKALI
GFLVFLIITTSIALAIVLYKIYVLQRKSSRHSEESVELIEHDDEKQLLNVEPILAEHLID
EYRRKHADESRLFLAEFQSIPRVFSKFNSKEARRGCNSIKNRYIDILPYDHNRVQLTPVP
GAHGSDYINASFIDGFNESRKYIAAQGPKEETSNDFWKMVWEQKATIIVMVTRCEEGKRP
KCAQYWPNLDETSKPFGDIAVRIGTEKWCPDYVIRKLYISNQEKGPEREVTHIQFIRWPD
HGVPEDPHLLLKLRQRVNAFRNLFSGPIVVHCSAGVGRTGSYIGIDAMMQGLETEGRVDI
YGYIVQLRRQRCLMVQVETQYILIHQALLEYYLYGETEVNLSELPKHLTNFKKNDPPTEP
SLLEIEFQKIPPYTDWRSQSNGRRGENQTKNYSLSVIPYDYNRVTIKLEGDRSKDSESHS
DSDLSSDESEDEESLKYINASYIDGYWHDETLIATQTPLTGTIADFWMLVYQRKARIIAV
LGKLKDDKDCVQYWEDGTKTYDDIEVKLADCIDKPTYIVREFEIRHTKRKETRKVYQYHF
HSWSESEIPEDPDNLVNMITTIKEKLSPLKVAEDITPPLIVHCRDGSKQTGVFCALWNLL
DSASTENLIDVLQTVKALRKQRTGMLLSFAQYQFLYDTIASTYPVQNGTLISDNGPSETT
LDIISETNPENKSQQSTAYDSAKNKEVSSEEDEAKSSSSNDKQPAENPINGPVTSGEIA
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagttttcctggctgaaatacttggctcttgccgctgcactattgggtgcaact
gttgacgcccaagtttcaccgacaacagtggctcccaccacctcctccgtggccagcact
gcagcagatcactcatcactcaccacctccagcatggctccaacaacagtgactactgca
ttcacaccaggttcaaatcactcatcacgcacactcactagcacagcttcaacagtgact
actgcacccacagctggctcaagtctagatgttcatgaatcaacactcagagactccagc
acggcacctcaatccaatagcactgcaccagctccatatgttacgatacccaccaactcc
aacaccaactcaacagtgattcccacacgctctgaaacttcagcaccatcagaaggcaca
gctataaatgacacaaccacaggcttccttaatgaatcagtgacttctgcacccatttac
accacctcaaactcaactaccccatccggcgatgagaattgtgcgaatattactgccaaa
cgacttagtgtcacaagtaacaatgtcacccttaacattagttacaccatcactgaaagt
caaaacatcacaatactgaataaattaattttattggatgaaaataaaagcagcatcata
gaatcactagttgggcttgatgattgtaccaattacaacctcatggcgattttcagtggg
aaatgtagacagcaaatttcactggcaaacatcacaaccggaccacctcccgatcttcaa
ttcgaactaactaagaagcagtctgaaggcaatattatttttaagctgaatcaacaacat
gccaattgtggatggaagtatacttggaactgcacttcacccgaaggaagtaacattgaa
aatcaagaaaatcaagaaatagcaacattttacaatataactccctgcaaagactacata
tgctctctcaatattcaacacaactctacaaattggactcaaactgtaactggtaacata
acagcggaatatgaagaaccgaacgagccaacatttgaattggcatctaaagaaaagagc
attgatgtgacgtggaattttattgttaccaaacaaaaagcagtaacgtccgtcaaaata
acttgcagccctgaagttaaatatgaagatagaaaccaagaagtaagaagtgatactgtc
agaagcggagtacacacattttacaatctgactccgtatgcaaaatatacagtaactgtt
aatgtcagcaataagtgcacagaaggaggagttttgtcaaattggtttacaaaacaaatt
gagactcaagtaggtgttccaaagaaacctgaatcagaactaagcttaatagcaaataat
gcgatcaaactcaaatgtacgaagttgaaggataaagatttccatggaccagaaagtacc
tatttcgccaaagttaatgaaaaagtccaattccgaaaaaattctgaaaagtgtgaattt
gtgtttgaagacttaagctatctgactacatacaaagtagagctaattgccagcaatgga
aagtacaacagtagcagtatagataccatcacaactaaatacaatgacaaggcattaatt
ggattcctggtgttcctgatcattacgacttcaatagctctggccatcgtactctacaaa
atatacgttttgcagaggaaatcttcaagacattccgaagagtctgtggaacttatcgaa
catgatgatgaaaagcagctactgaatgtggagcccatcctcgcagaacacctgattgac
gagtataggagaaaacacgctgatgaatcaagattatttttagcagagttccaaagcatt
ccgagggtcttcagcaaatttaattccaaggaggcacggcgaggttgtaattcaatcaag
aaccgatatattgacatcctaccttatgatcacaaccgtgttcagcttactccagtgcct
ggagcgcatggctcagattatatcaacgcaagcttcattgatggcttcaacgaatcaagg
aaatacattgctgcccaaggcccaaaggaagaaacatctaatgatttctggaaaatggtg
tgggaacagaaagcaacgatcattgtcatggtaactcgctgtgaggaagggaagcggcct
aaatgtgctcagtattggcctaatttggatgaaacgtccaagccctttggtgacattgct
gtaagaattgggacggagaagtggtgcccagactatgttattcggaaactctacatttca
aaccaggaaaaaggtcctgagcgagaagtaacacacatccagttcattagatggccagac
catggtgttcccgaagatccacacctccttctcaaactgcggcagagagttaatgcattc
agaaacctattcagcggcccaatagttgtgcactgcagtgctggggtgggtcgcacaggt
agctacatcggaattgatgccatgatgcagggccttgagactgaagggcgagtggatatc
tacggttacatcgttcaactccgtcggcaacgttgcctcatggtgcaggttgagacgcag
tacattctgatccaccaggctttgctggagtactacctctatggtgaaactgaggtcaat
ctgtctgaactgcccaagcatctcactaactttaagaagaatgacccaccaactgagcca
tcgctgctggaaatagagttccagaagatcccaccttatactgattggagatcacagagc
aatggaagacggggagaaaatcaaactaaaaattattctctttcagtgatcccatatgat
tacaacagagtaactatcaaattggaaggcgacagaagcaaagacagtgagagtcacagt
gattctgatttgtcctctgatgagagtgaagatgaagaatccctgaaatatatcaatgcc
tcctacatagatggttattggcatgatgagacattgattgctactcagactccgctgact
ggaaccattgctgacttttggatgctggtgtatcaaagaaaggcgaggatcatcgcagtg
ctgggcaaattaaaagatgacaaggattgtgtacaatattgggaagatgggacgaaaacc
tatgatgatattgaagttaaattagctgattgcattgacaaaccaacatatattgttcgc
gagtttgaaataagacatacaaagagaaaagaaactcggaaagtgtaccaatatcatttt
catagttggtctgaatcggagattccagaagatcctgataacttagtcaatatgataacg
accatcaaggaaaaactgtcaccactcaaagttgctgaagatataacaccacctctgatt
gtacactgcagagatggatccaagcagacaggagtattctgtgctctctggaaccttctt
gacagtgcaagtactgaaaatttaatagatgttctccagacagtcaaagcactgcgcaaa
cagaggacaggaatgcttctatcttttgcgcagtaccagtttctctatgacacaattgcc
agcacttatccagtacagaacgggacattaatatctgataatggtccatcagagaccact
ttagatataatctctgaaactaatccagagaacaaatctcagcaaagtactgcttatgac
tctgctaagaacaaagaagtatcctcagaggaagatgaagcaaagtctagcagcagcaat
gacaaacaaccagcagaaaaccctatcaatggacctgtaacaagcggtgaaattgcgtga
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