Scyliorhinus canicula (smaller spotted catshark): 119965433
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Entry
119965433 CDS
T11175
Symbol
sqstm1
Name
(RefSeq) sequestosome-1
KO
K14381
sequestosome 1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04137
Mitophagy - animal
scau04140
Autophagy - animal
scau04217
Necroptosis
scau04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119965433 (sqstm1)
04137 Mitophagy - animal
119965433 (sqstm1)
09143 Cell growth and death
04217 Necroptosis
119965433 (sqstm1)
04218 Cellular senescence
119965433 (sqstm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119965433 (sqstm1)
03029 Mitochondrial biogenesis [BR:
scau03029
]
119965433 (sqstm1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scau04147
]
119965433 (sqstm1)
Membrane trafficking [BR:
scau04131
]
Autophagy
Mitophagy
Cargo receptors
119965433 (sqstm1)
Pexophagy
119965433 (sqstm1)
Aggrephagy
119965433 (sqstm1)
Xenophagy
119965433 (sqstm1)
ER-phagy
ER-phagy recepters
119965433 (sqstm1)
Other autophagy associated proteins
Midbophagy
119965433 (sqstm1)
Mitochondrial biogenesis [BR:
scau03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
119965433 (sqstm1)
Exosome [BR:
scau04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
119965433 (sqstm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
119965433
NCBI-ProteinID:
XP_038652139
LinkDB
All DBs
Position
4:complement(229155970..229231718)
Genome browser
AA seq
446 aa
AA seq
DB search
MAFNVKVYLLGKEETNREIRRFTVDHGVSTSFEYLYKKVGSVFQSLRSENFQMYYKDEEG
DMIAFSSDDELMMALSFLKEGTFRVYIREKKECKHGQDKGTGPIHPNIICDACNGPVIGA
RYKCSVCPDYDLCGACKGKGFHKEHEMLLVQTPQFVHPFERFPRGMWHHKKRNGGLCHWA
MAQQESFAQAAACSGRQQSPAAKLTPAEEAEASGSQKQDQNVNVNYLKNVGRNVAAMLSP
LGIDVDIDVEHRGQRFKATECPGESQPTSADNDPQPHPSSDDQRKKKETANSSQEQSEPL
LMDMDQSATNNNPFDAYTPSTVGSKTPSVDNNIDEEWTHLSDKGVDPSTGELQSMQQLCL
QEYEESLNQRQSSSSYELGPTGLREAALYPHLPQDAAPCLIEALSQMLSMGFNDEGGWLT
RLLQTKQCDIGSALDAMQPAKGPARK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggctttcaacgtgaaggtttatctgctggggaaagaggaaacgaaccgggagatccgc
cgcttcaccgtcgaccacggcgtctccaccagcttcgagtatctctacaagaaggtgggc
agcgtcttccagagcctgcgatccgagaacttccagatgtattacaaagatgaggaaggg
gatatgattgcgttctctagtgatgatgagctgatgatggctttgtcctttcttaaggag
ggaaccttccgcgtctacatcagagaaaagaaagagtgcaaacatggacaggacaaggga
actgggccaattcatccaaacattatctgtgatgcctgcaatggcccagtgattggtgct
cgctacaagtgctctgtgtgtcctgactatgatctgtgtggtgcctgcaaggggaaagga
ttccacaaggaacatgagatgctgctggtccagacccctcaattcgtccatccatttgag
cggtttccccgagggatgtggcaccacaagaagagaaatggaggtctgtgtcactgggca
atggcacagcaggaatcctttgctcaggcagcagcttgcagcggtagacagcagtcacca
gctgcaaagctgaccccagctgaggaagctgaagcttctggaagccagaagcaggaccag
aatgtaaatgtgaactatctgaagaatgtgggacgaaatgtggctgcaatgctcagtcca
ctgggtattgatgttgacattgatgtggaacaccggggccaacgttttaaagctactgag
tgccctggggagagccagcccacctctgcagacaatgacccacagccccatccatcatct
gatgaccagaggaagaaaaaagaaactgccaactccagccaagaacagagcgagcctttg
ctgatggacatggatcagtcagccacaaacaacaacccctttgacgcttacaccccaagc
actgtgggttccaagacgcccagtgttgacaataatattgacgaggaatggactcatcta
tcagacaaaggggttgatccatcaactggtgaactgcagtcaatgcagcaactttgtttg
caggaatatgaggaatctttaaaccaacggcaaagttccagctcttatgaactgggaccc
acgggactgagagaagcagctctgtaccctcatcttccacaggatgcagcgccatgtctg
atagaagccttgtcccagatgctgtccatgggattcaacgatgaaggaggttggttgact
cggctcttgcagaccaagcagtgtgacattgggtcagcactagatgccatgcagcctgcc
aaagggccagctcgcaaataa
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