Scyliorhinus canicula (smaller spotted catshark): 119965441
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Entry
119965441 CDS
T11175
Name
(RefSeq) platelet-derived growth factor receptor beta-like
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04010
MAPK signaling pathway
scau04020
Calcium signaling pathway
scau04510
Focal adhesion
scau04540
Gap junction
scau04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119965441
04020 Calcium signaling pathway
119965441
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119965441
04540 Gap junction
119965441
09142 Cell motility
04810 Regulation of actin cytoskeleton
119965441
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
scau01001
]
119965441
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
scau04090
]
119965441
Enzymes [BR:
scau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
119965441
Protein kinases [BR:
scau01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
119965441
CD molecules [BR:
scau04090
]
Proteins
119965441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
VEGFR-1-like_Ig-like
ig
V-set
Adeno_E3_CR1
Motif
Other DBs
NCBI-GeneID:
119965441
NCBI-ProteinID:
XP_038652152
LinkDB
All DBs
Position
4:complement(230092234..230233211)
Genome browser
AA seq
1245 aa
AA seq
DB search
MRMSTIRWGLFLAGFLLTSSLGESSESHLEWKEIILQPSSNITLNCSGDGHVEWTYEEGV
HVQPDGRFLHIYNATTKHNREYNCSCNKTEITSFYIFVPDPKEWFRPQNLDDMVILMMES
SGVSTIPCLVTNPDIKVTLLHEETDTIMDIPYNNKQGFIGRFRDGTYLCKATLNGVEKIS
EPYFVETLGGGDLNVKLHASRAMVKLGEPIRVTCSANNELLEFKWSYPRMDGAEIIVSDQ
GDAVNSTLYLESATLKDSGWYNCSVTGFYPENQFEEKSLQITVLNPKEWFRPQNLDDMVI
LMMENSSTIPCLVTNPDLQVTLLHEETDTIMDIPYNNKQGFIGRFRDGTYLCKATLNGVE
AISEPYFVETLGGGDLNVKLHASRAMVKLGEPIRVTCSANNELLEFKWSYPRMDGAEIIV
SDQGDAVNSTLYLESATLKDSGWYNCSVTGFYPENQFEEKSLQITVLTHGLVHLNTDLSD
TEYAELSEVKMFVVNITAYPAPTVTWLKDNVPFNERSNQVTFSNKTLGENRYQCILNLIR
VKEEDFGNYSIQVWNADSKKEFTFTLRVNVPARILDLTDFVQPSGVQTVTCVTEGSPLPE
VSWHMCHDLKRCNNKLGKWTPLKMNSSGVRVEKRISELQENRVFHVESVLVQEGAGETAA
VRCSAVNGFGTVSREIKLISHGIRSQLVTVATILVLLVIMIISLVVLVVVWRKKPRYEIR
WKVIESISSDGHEYIYVDPMQLPYDSSWEFPRNQLSLGRTLGSGAFGRVVEAMAHGLNHS
NSTMKVAVKMLKTTARTSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIITEYCR
HGDLVDYLYKNKHTFLQHYADKGQSEANTVITNSYNERLKSYVALSFENDGGYMDMTKDE
QLEYMPMLEAKREPNYADIEHPDYNRPYSQENSAPTEREVTEDKLLVSESAILSYMDLVG
ISYQVAEGMEFLSLKNCVHRDLAARNVLICEGKLAKICDFGLARDIMNDSNYISRGSTFL
PLKWMAPESIFNNLYTTRSDVWSYAVLLWEIFTLGGTPYPELPVNDQFYNAIRRGYRMPK
PHYASDEIYEIMQKCWNDEFEKRPSFSNLVQSMGNLLTEGYKKKYAQVNQEFLKSDHPAM
CRTGVKFFQVDDNVIYSNCTERLPNGTNNGYIIPLPDPDPCEASSPTENSLSESATGTRP
SSLVCVENGELSNASDSAQVTEDPKELEMDTEDDANLPDVEDSFL
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgtccaccatcagatggggtcttttccttgcaggattcctgctcacaagttct
ctcggtgaatcttctgaaagtcacttggaatggaaagagataattttgcagccttcttcc
aacatcaccctgaactgctccggggatggtcacgttgagtggacctacgaagaaggcgtc
cacgtccagcctgatggccgttttctgcacatttacaatgcgaccactaagcataacaga
gagtacaattgctcctgtaataaaacagagataacaagcttctacatctttgtaccagat
cccaaagaatggttccggccacaaaacctggacgatatggtcatcctcatgatggaaagt
tccggtgtttccaccatcccatgtctggtgaccaatcctgacatcaaagtcacactgcta
cacgaggagaccgacaccatcatggacataccgtataacaataaacaaggctttatcggc
aggttcagggatggaacctatttgtgtaaagccacattaaatggagtggagaaaatatct
gagccatactttgtggaaacgcttggaggtggagatctcaatgttaaacttcatgcatca
agagccatggtcaaactgggagagcctatcagagtcacctgtagtgcaaacaatgaattg
ctggagttcaagtggagctacccgaggatggatggggctgaaataattgtgtcggaccag
ggtgatgcggtgaactctaccctgtacttggaaagtgccacattgaaagattccggatgg
tacaactgcagcgtgacaggattctatccagagaatcaatttgaagaaaaatctctgcaa
attaccgttctcaatcccaaagaatggttccggccacaaaacctggacgatatggtcatc
ctcatgatggaaaattcttccaccatcccatgcctggtgaccaatcctgacctccaagtc
acactgctacacgaggagaccgacaccatcatggacataccgtacaacaataaacaaggc
tttatcggcaggttcagggatggaacctatttgtgtaaagccacattaaatggagtggag
gcaatatctgagccgtactttgtggaaacgcttggaggtggagatctcaatgttaaactt
catgcatcaagagccatggtcaaactgggagagcctatcagagtcacctgtagtgcaaac
aatgaattgctggagttcaagtggagctacccgaggatggatggggccgaaataattgtg
tcggaccagggtgatgcggtgaactctaccctgtacttggaaagtgccacactgaaagat
tccggatggtacaactgcagcgtgacaggattctatccagagaatcaatttgaagaaaaa
tctctgcaaattaccgttctcacccatggacttgttcatctcaacacagatttgagtgac
accgaatacgcagagctgtcagaggtgaaaatgtttgtggtgaatataacagcatatcca
gccccgactgtcacgtggctgaaggacaatgtaccatttaacgaaaggtccaatcaagtg
acatttagcaacaaaaccctgggagaaaacaggtatcagtgcatactcaacctcatccgt
gtgaaggaggaagactttggcaattacagtattcaagtctggaatgccgacagcaaaaag
gagtttaccttcactttaagagtaaatgtaccggcgaggatcctggacctcactgacttt
gttcaacccagcggtgtgcagactgtcacctgtgttactgagggatcgccgttgcctgaa
gttagttggcacatgtgccatgacctaaaaaggtgcaacaacaagctgggcaaatggacc
ccactgaaaatgaactcgagtggggtccgcgtggagaaacggatctccgagctgcaggaa
aaccgcgtcttccacgtggagagtgtcctcgtccaggagggtgccggcgaaactgccgct
gtgcgctgctccgccgtcaacggatttggaaccgtgagccgggagatcaagctcatttct
cacggtatccgctctcagctggtcaccgtggcaacaatcctggttttgttagttatcatg
atcatctcgttagtggttctggttgtagtttggcggaagaagcctcgctatgaaatccgc
tggaaagttattgagtccatcagctcggatggacacgaatacatttacgttgacccaatg
cagcttccgtacgattcaagttgggagttccccaggaaccagctgtctctgggtcggacg
ctgggatctggtgcctttggcagagtggttgaagcaatggcccacggactgaatcactcc
aactccaccatgaaagttgccgtgaagatgttgaagactacggcaaggaccagtgagaaa
caggccctcatgtcagagctgaaaataatgagtcatctcggacctcatttaaatatcgtg
aatctcctgggagcctgtaccaaaggaggcccgatctacatcatcaccgaatactgtcgc
catggcgatctggtggattacctgtacaagaacaagcacaccttcctgcagcattatgct
gacaaaggtcagagtgaggcaaataccgtcatcacaaactcctacaatgagaggttgaag
agttacgtagccctgtcctttgagaatgatggagggtacatggacatgactaaagatgag
cagctcgagtacatgcccatgctggaagctaaacgtgaaccgaactacgctgacattgaa
caccccgattacaacaggccgtactcacaggagaacagcgcccccactgagcgtgaggtc
actgaggataaacttctggtcagcgagtctgcgatactgagctacatggatctggtcgga
atcagttatcaggtggcagaaggaatggaattcctctcattaaaaaattgtgtccatcgg
gatttagcagcccggaatgtgctgatctgtgaaggaaaacttgcgaaaatctgtgacttt
ggattagcgcgggacataatgaatgattccaattatatttcaagagggagtacctttttg
cctttgaaatggatggcgcctgagagcattttcaacaacctgtacaccacacggagcgac
gtctggtcctacgcagtcctgctctgggagatcttcacccttggtgggacaccgtatcca
gaacttcccgtcaacgaccagttctacaatgccattaggcgtggttacagaatgcccaaa
cctcactatgcctctgatgaaatatatgaaatcatgcaaaaatgctggaatgatgaattt
gagaagagaccttctttctccaatttagtacaatccatgggcaatctgctcactgagggc
tataagaagaaatacgcccaagttaaccaggagtttctaaagagtgaccacccagcaatg
tgccgcactggggttaagttcttccaagtcgacgacaatgtgatctactccaactgcaca
gagcgtcttcccaacggcaccaacaatggctacatcatcccactgcccgacccagacccc
tgtgaggccagcagcccgacggagaactcgctgagtgagtccgccacagggacaaggccg
agttccctggtatgtgtggagaatggagagctaagtaacgccagcgattctgctcaggtg
acggaagaccctaaggagcttgagatggacacagaagatgatgctaacctgcccgatgta
gaggacagctttctgtga
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