Scyliorhinus canicula (smaller spotted catshark): 119966057
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Entry
119966057 CDS
T11175
Name
(RefSeq) heterogeneous nuclear ribonucleoproteins A2/B1-like isoform X1
KO
K13158
heterogeneous nuclear ribonucleoprotein A2/B1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scau03019
]
119966057
03041 Spliceosome [BR:
scau03041
]
119966057
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scau04147
]
119966057
Messenger RNA biogenesis [BR:
scau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
119966057
Spliceosome [BR:
scau03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
119966057
Exosome [BR:
scau04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119966057
Exosomal proteins of colorectal cancer cells
119966057
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_7
Motif
Other DBs
NCBI-GeneID:
119966057
NCBI-ProteinID:
XP_038653166
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All DBs
Position
5:complement(76141061..76177361)
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AA seq
346 aa
AA seq
DB search
MENRDKEQYRKLFIGGLSFNTAEDNLRGHFEQWGKLTDCVVMRDPQTKRSRGFGFVTFST
PEEVDDAMAARPHKIDGRVVEPKRAVAREESGKPGAHLTVKKLFVGGIKDDTDEHHLRAY
FKNYGKIETIEVITDRQSGKKRGFAFVSFDDHDPVDKVVLQKYHYVNGHNAEVRKALSRQ
EIMDAQSNRSGRGGGGFRGDSRSSGNFPLGRAGNFGSSPNGYGGGRGFGDGPGFNGYGGG
GNFGSSSFSGGFGGSPSGGFGNHGGGYDGGGNYGGGFGRYGQRNHGELVINAIHIATGVP
IKKAVFCLDGADWNCTYPFKCGISHGIYLVDGGQALGVWRKFWWRW
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggagaacagggataaggaacagtatcgcaagctgttcataggtggccttagctttaat
actgctgaagataatttgagaggccactttgagcaatggggaaagcttacagattgtgtg
gtaatgagggatcctcagaccaagcgatcaagagggtttggatttgtgacattctctact
cctgaagaagttgacgatgcaatggctgctaggcctcataaaattgatggccgcgtagtg
gagcctaaacgagcagtcgcaagagaagaatctgggaaaccaggtgctcacctgactgtg
aagaaactttttgttggtggaataaaagatgacactgatgaacatcaccttagagcgtac
tttaagaactacggaaaaattgaaaccattgaagtaataacagaccgccaaagtgggaaa
aagaggggttttgcatttgtatcttttgatgaccatgatcctgttgacaaagtagtcctt
caaaagtatcattatgttaatggacacaatgcagaagtaagaaaagctttgtctcgtcaa
gaaataatggatgcacaaagtaacaggtcaggacgtggaggtggtggctttagaggagac
tctcgttcaagtggcaattttcctttgggacgtgcaggaaactttggcagcagccctaat
ggatatgggggtggtcgtggttttggtgatggtcctggtttcaatggttatggtggaggc
ggtaactttggaagctcaagctttagtggaggctttggtggaagccctagtggtggattt
ggcaaccatggtgggggctatgatggaggtggaaattatggtggtggatttggaaggtat
ggtcaaagaaaccatggcgagttggtgataaatgctatacacatagcaactggggtgcca
atcaagaaggctgttttttgcctggatggtgcagactggaactgtacttatccattcaaa
tgtggaatatcccatggcatataccttgtagatggtgggcaggctttgggagtctggagg
aaattttggtggaggtggtag
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