KEGG   Scyliorhinus canicula (smaller spotted catshark): 119966363
Entry
119966363         CDS       T11175                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1-like
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
scau  Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03420  Nucleotide excision repair
scau04110  Cell cycle
scau04114  Oocyte meiosis
scau04120  Ubiquitin mediated proteolysis
scau04141  Protein processing in endoplasmic reticulum
scau04310  Wnt signaling pathway
scau04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:scau00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    119966363
   04120 Ubiquitin mediated proteolysis
    119966363
  09124 Replication and repair
   03420 Nucleotide excision repair
    119966363
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    119966363
   04350 TGF-beta signaling pathway
    119966363
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    119966363
   04114 Oocyte meiosis
    119966363
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:scau04121]
    119966363
   03400 DNA repair and recombination proteins [BR:scau03400]
    119966363
Enzymes [BR:scau01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     119966363
Ubiquitin system [BR:scau04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   119966363
  Multi subunit type E3
   SCF complex
    Ring finger protein
     119966363
   Cul2 complex
     119966363
   Cul3 complex
     119966363
   Cul4 complex
     119966363
   Cul7 complex
     119966363
   Cul8 complex
     119966363
   Cul9 complex
     119966363
DNA repair and recombination proteins [BR:scau03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      119966363
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      119966363
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 119966363
NCBI-ProteinID: XP_038653824
LinkDB
Position
5:158570971..158571384
AA seq 108 aa
MATAMDVDAPSSANSAGGKKRLEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVTWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcgacggcgatggatgtggacgctccgagttccgccaacagcgccggtgggaagaag
cgcttagaggttaaaaagtggaatgcagtcgccctgtgggcctgggacattgtggtagat
aactgcgccatctgccgaaatcacatcatggacctgtgtatagaatgtcaggcaaaccaa
gcttccgcaacttcagaggaatgcactgtcacatggggggtgtgtaatcatgctttccat
ttccactgcatttcacgttggctgaagactagacaagtttgccctctggacaacagggag
tgggaattccagaagtatggccactga

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