Scyliorhinus canicula (smaller spotted catshark): 119968772
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Entry
119968772 CDS
T11175
Symbol
ttc3
Name
(RefSeq) E3 ubiquitin-protein ligase TTC3 isoform X1
KO
K15712
E3 ubiquitin-protein ligase TTC3 [EC:
2.3.2.27
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
scau04121
]
119968772 (ttc3)
Enzymes [BR:
scau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119968772 (ttc3)
Ubiquitin system [BR:
scau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119968772 (ttc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC3
TTC3_DZIP3_dom
wHTH_TTC3
TTC3_9th
TPR_1
TPR_2
zf-RING_2
TPR_11
TPR_16
zf-rbx1
TPR_12
zf-C3HC4_2
zf-C3HC4
CARD
TPR_17
ANAPC3
TPR_8
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-RING_11
zf-ANAPC11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
119968772
NCBI-ProteinID:
XP_038657410
LinkDB
All DBs
Position
7:20807749..20944748
Genome browser
AA seq
1917 aa
AA seq
DB search
MDDSSSDSEDSKLVYHQNSFLNEPIFERDSQVKPKNNMDGAEMWHSDNAKNNPMFCKRRH
VISIHILWPFLFAQKNMVDRFLEWAFAARFIDAENYDVFEIDVMKLQSIELLEVVLEAIG
KHNHSTKFLSCLLDLWDKVDGFNCDLDDAIDMIEKTGEFNSLRGEVSSGTKRSRMAAIAI
SVFQYAYFVKMYLNCENIPNLIPKREDQKSEEYRNRGNDEFKNENYEAAVNWYSKAIDLR
PDNELLYGNRALCLLRIENYMKALGDGKRAIVLKPNWPKGHYRLCDALFSLGEHKRAIAA
NTKAQQLCKDVPDGIRDLIQQKERFLKKQRDENRGRTRTDGLKEELNIKKEHSKLPTKPL
CESYKSDSNRNQERNGLKTRLSQYPEKTLMPVNDSDNIMSKLKSLIHDGYIALLDKRAHN
AKNAFIKLLNLVDHEKLEELSLSTNDYVIIIYGHACALLGIGLPEELTEAENQFNKILEQ
FPKQRLDCLAFYGLGKVYFRQNRFADALDPFTKSLTMVNRKIVPGILTWPTTTVVIEETQ
DEKLKTMLEEYIGKCRFPPESDAICRYPHCQGHSKIQIYFSDPDFKGFIQVQCYLQCHVE
YHINCWKKLKATSFEDKNDKDFLRGPCFTPDCGGQISKIIIFNSKGLMKCEFEAKIVKSK
DPSKTVVKQKCSSVSKLMIKEDRKQARKQFRKEASRHKAEKQMKEKVERNNSLEEATSKS
GHSWDPLGDRMLQLITENKEQIKTGVKNVSNLLQELLSFHVLSEQDYDRLCTGASKPCQV
MGQLLDLIVQKNNRIKTREFLYTLSKCDDVDNKLLDWINWLNDAGREAAYLFLSRYSNCL
EQLDLSSLLELLDASRIDLPMSDSSKEIVEQLKQESPTKTRSFIWMLEEKREQFPSLQNP
LDEYFNAMDAPCTVLKKQENEELSITGLKSKIRNRKKKPKDSKPFLLLSGTVGTGTRGEE
DDEIFSDDGILAQMNSAVPFTIPEYLRGQLEDFDDIYDPQKCGNHYQRVLDNHPDPTRES
LYDYFAQILNEHGPMEIDDPMLVGEFENFPPEAQELVRNAGGLKSFLMESLRFVMINSLI
GLMKHAVQLKNLPLNENPATRGTVESENNSDEVSSESLRPVAHLNPTAKEFKPVSLHQSF
LSCPSVTTSLSEIQNLNQHLHYDAELGINISTDNMYTNSNLYSDESIPDSQSSNIGSLDH
NVEANDPLADHHLSAVASASQSSSAFNPTLCNDVLSSPMHSDIEQGRPVFSNLPITNYNY
QFQSLNSHGGCNPMTNKMENMTLSSTSANTIVMDTLEEIPLSDFKPEDANGASSKLSSKV
SDNTSSNKCGNKRGPLLRTIAVQAHRESLSNAKINTDPFQPFEKQQGDILRIEKEHNVLQ
KQLQEAEEKYDQLAVRSTNEIAALEEKMSAFIKKNELLKSELDLLRQDLESEIKKSQQEK
RENNENLKIPKSKVKSLADLNVMYTEHIQANEQLYEKRSQEFEELSNQSSREKKRVEDAI
KKSVDVYQETKKRANDAEVSALESWRNTQLFFHYRAAEDAKGFLDKMKATAASSSISAMP
QLQILIATWESFLFAINQQIRQTEIQFHNQMTLVKDGTQLNSLPLVTIPSLPALPNSNMI
LENGSFVDPAIIASFPSASEISSIPQAGTTPKPLPSLMQAALGTAKVTSKAPSVTSSFQN
QSSANQIQHKASLAKHQSAWLPINNKSAKSSVPELANSAVIQPPASRPVITTSQQPKNSF
DKIINRLSTMFPHYSRVYLTNFIKEVRSANGGSLSGLVYDEIINRVAELILDRQDKTRFP
SSTIQQSAILAHQKPTSDFVALPAALGEGSRPNTPSAAWKLDKAQTGSRWHGNDPATFDG
EPCIICHEDLTQDTMRVLDCKHHFHKLCIEQWLRENSTCPTCRVHALLSEDFPDLTK
NT seq
5754 nt
NT seq
+upstream
nt +downstream
nt
atggatgattctagttcagactccgaggacagtaaactggtttatcatcaaaatagcttt
ctgaacgaaccaatatttgaaagagacagtcaagttaagccaaaaaataatatggatgga
gctgagatgtggcattctgacaatgcaaaaaataatccgatgttttgcaagcggaggcat
gtgatatccatacacatactatggccgtttttatttgctcagaaaaatatggtagatcgt
ttcctagagtgggcctttgcagccagattcatagatgccgagaattatgatgtctttgaa
atcgatgtgatgaagctgcaaagtattgaactcctggaagtggtgcttgaggcaataggg
aaacataatcactctacaaaattcctgtcctgcttattggatttatgggataaagtagat
gggtttaattgtgatcttgatgatgccattgatatgatagaaaagacaggagaatttaac
tctctgcgtggggaggtgagctctggaacaaaacggtcacggatggcagccattgcaatt
agcgtttttcaatatgcatattttgtaaagatgtatctaaattgtgagaacattcctaat
ttaataccaaagagagaggaccagaaaagtgaagaatatagaaatagaggcaacgatgaa
tttaaaaatgaaaactatgaagctgctgtaaactggtactccaaggcgattgatttaaga
cctgacaatgaacttctatatggaaaccgagctctttgccttttacgaattgaaaattac
atgaaagcacttggtgatggaaaacgagccatagtcttgaaacctaattggcccaagggt
cattatcgtctgtgtgatgccttgttctcgttgggagaacacaagcgagctattgctgct
aataccaaagctcaacagttgtgcaaggatgttccagatggaattcgggatttaattcag
cagaaagaaagattccttaaaaagcagcgagatgaaaatcgtggaagaacaaggactgat
ggattaaaggaggagctaaatatcaaaaaggagcattcaaagttaccaactaagccatta
tgtgaaagttacaaaagtgattccaacagaaaccaggaaagaaatggattaaagacccgt
ctttcacagtaccctgaaaagactctgatgcctgtaaatgattcagacaatataatgagc
aaattgaagtctcttattcatgatggatacatagccttattggacaagcgtgcccacaat
gcaaaaaatgcttttataaagttgctgaacctagtggatcatgaaaaacttgaggaattg
tctttgtccactaacgattatgtgataattatttatggtcatgcctgtgcccttcttggc
attggactgcctgaggagctgactgaggctgaaaatcaatttaataaaatcttggaacag
ttcccaaaacagcggcttgactgtttggcattctacggacttggcaaagtgtacttccgg
cagaacaggtttgctgatgctttagaccctttcacaaaatccttaactatggtaaatcgt
aagattgtcccaggcatactaacatggcccacaacaacggttgttattgaagaaacacag
gatgaaaagttaaagacaatgttggaagaatacatagggaaatgccgattccctccagaa
tctgatgcaatctgccgctatccacattgccagggacattctaagatccagatctacttc
tcagacccagattttaagggttttattcaagtgcagtgctacctacaatgccatgtggaa
taccatatcaattgttggaagaaattgaaggcaacgtcctttgaagataaaaatgacaag
gattttctcagaggtccatgtttcacacctgactgtggagggcaaatttcaaaaatcatc
atctttaattcaaaaggccttatgaagtgtgagtttgaggctaaaatagtaaaaagcaaa
gacccgtcaaaaacagttgtgaagcagaaatgttcaagtgtttcaaagttgatgattaaa
gaagaccgtaagcaagccaggaaacagtttagaaaagaagcatcaagacacaaagctgaa
aaacagatgaaagaaaaagttgaaaggaataacagcttggaagaagccacttctaaatcc
ggtcattcctgggatcctcttggtgatcgaatgttgcaactgataactgagaacaaggaa
caaataaaaactggggtgaagaatgtttcaaacctacttcaagaattgctttcctttcat
gttctaagtgaacaggactatgacaggctttgcacaggtgcctccaaaccatgccaggtt
atgggccaacttcttgacctcattgtgcagaaaaataacagaataaagaccagagaattc
ctctacacccttagcaagtgcgacgatgttgacaacaagctgttagattggatcaattgg
ttaaatgacgcaggccgtgaagcagcatacctcttcttgtctcgttactcaaactgctta
gagcagttggacttgagctctctactagaattgctggatgcatctaggattgatctaccc
atgtctgatagcagtaaagaaattgtagaacaattgaaacaggaatcgcctacaaaaacc
cgcagttttatatggatgttggaggagaagagagaacaattcccttccctacagaatcct
ttagatgaatattttaatgcaatggatgctccttgtactgtactaaagaaacaggaaaat
gaagaattatctataactggtcttaaaagtaaaattagaaacagaaaaaagaaaccaaag
gattccaagccttttctccttctgtctgggacggttggaactggaacccgtggggaggaa
gatgatgaaatattctcagatgatggtatccttgcccaaatgaactctgcagtccctttt
acgataccggagtaccttcgtggtcagctcgaggattttgatgatatttatgatcctcag
aaatgcggcaatcattaccagcgggtcctagacaatcacccagacccaacacgtgaaagt
ctatatgactatttcgcccaaattctgaatgagcacggcccaatggaaatcgatgatccg
atgttagttggcgagtttgaaaacttcccaccggaggcccaagagctggtgcgaaatgca
ggtggtttgaaatcgttccttatggaatcactgcggtttgtgatgattaacagcctgata
ggactgatgaagcatgcggtacaattgaagaacttgcctttaaacgaaaacccagcaacc
agaggcaccgtggaatcggagaacaactcagatgaagtttctagtgaaagcttacgccca
gtggctcatctcaaccctactgctaaagaatttaaacctgtctctcttcatcaatcattt
ttatcatgtccgtcagttacaacttcactaagtgaaatacaaaatcttaatcagcattta
cattatgatgctgaactaggaattaatatttcaacagataatatgtatacgaatagtaat
ctatactctgatgaatccataccagatagccagagctcaaatatcggctcattggatcat
aatgtggaggctaatgatccattggcagatcatcacttaagtgcagttgcttctgcctcc
caatcttcatcagctttcaatccaacactctgtaatgatgtattatctagtcctatgcac
tctgacatagagcaaggaagacctgttttttcaaatctacctattactaattataattat
cagtttcaatcccttaattctcatggaggatgtaaccccatgacaaataaaatggaaaat
atgacgctttcatctaccagtgcgaatacaatagtaatggacacacttgaagaaatacct
ctcagcgattttaagcctgaagacgctaatggtgcatcaagcaagttgagcagcaaggtg
tccgataatacaagtagcaataagtgtgggaataaacgaggtccattactaaggaccatt
gcagtacaggctcatcgggaatctttatctaatgccaaaatcaatactgatccttttcaa
ccatttgagaaacaacagggtgatattttgaggattgagaaagagcacaatgttctgcag
aagcagctgcaagaagcagaagaaaaatacgaccagcttgcggttcgcagcaccaacgaa
attgctgcacttgaagaaaagatgtctgcattcataaagaaaaatgagctgctaaaatct
gagcttgacttgctacgccaagacctggagagtgaaatcaagaaaagtcagcaagaaaag
cgagaaaataatgaaaacttaaagatacccaaatcaaaagttaaatctcttgctgatctc
aatgtaatgtacactgagcatattcaggcaaatgaacaactttatgaaaagcgttctcaa
gaatttgaggaattgagtaatcagtcatcaagagaaaagaaaagagtggaagatgccatt
aaaaagagtgtggatgtgtaccaagaaactaagaaaagagccaatgatgcagaggtgtct
gccctggaaagctggaggaacacgcaattgtttttccattacagagcagctgaagacgca
aaaggttttctcgataaaatgaaagcaacagctgccagcagctcaatctcggctatgcca
caacttcagatcttaattgcgacttgggaatcttttctatttgcaatcaaccagcaaatc
cgtcaaactgagatacagtttcataatcagatgactctggtaaaagatggaacacaactg
aacagccttccactagtgactatcccaagcctcccagcactaccaaactctaacatgata
ctggagaatgggagctttgttgatcctgctattatagcatctttcccttctgcaagtgag
atttcatccattccacaagccggtacaacacccaaacctctgccttctctaatgcaagcg
gccctaggaactgctaaagtaacgtctaaggctccatctgtgacatctagttttcaaaac
cagtcttccgcaaatcaaattcaacataaagcgtctttggcaaaacatcagtctgcctgg
ctgccaataaataataaatcagcaaaatcttcagtacctgagcttgcaaactctgctgtt
attcagcctcctgcaagccgacctgtgattacaacatctcagcaacccaagaacagcttt
gataaaatcatcaaccgtctttcgaccatgttcccccattattcacgggtctatctgact
aacttcattaaagaggttcgtagtgcaaatggtggttccctttctggattagtatacgat
gaaataatcaacagagtggcagaactcatcttggatcgtcaggacaaaacaaggtttccg
tcttcaaccattcaacagtccgcaatcctggctcaccaaaagccaacctctgactttgtt
gctttacctgcagcattaggcgagggctcgagaccaaatactccctcagctgcttggaaa
cttgacaaagctcagactggctcacggtggcacggaaacgatcctgcaacatttgatggc
gagccttgtattatttgtcatgaggatttaacacaagacactatgcgtgtgcttgattgc
aaacatcactttcataaactgtgcatcgagcaatggctgagagagaatagcacctgccca
acatgtcgagttcatgctctcctgtctgaagatttccctgatctgacaaaataa
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