Scyliorhinus canicula (smaller spotted catshark): 119969193
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Entry
119969193 CDS
T11175
Name
(RefSeq) toll-like receptor 8
KO
K10170
toll-like receptor 8
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
119969193
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
scau04054
]
119969193
04090 CD molecules [BR:
scau04090
]
119969193
Pattern recognition receptors [BR:
scau04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
119969193
CD molecules [BR:
scau04090
]
Proteins
119969193
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
TIR
LRR_5
LRR_14
LRR_12
TIR_2
Herpes_U34
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
119969193
NCBI-ProteinID:
XP_038658381
LinkDB
All DBs
Position
7:92291736..92398310
Genome browser
AA seq
1041 aa
AA seq
DB search
MAQGTSDSALILLFFLFLLNFVVTPLTTGWIPRSLPCDVSIQNNGSSIQLDCRSHRLHQV
PRNIPSNATSLDLAYNQITNISNCSFSSLQNLTKIDLRGNVLPGKNMLIAKGSFSTLKKL
QELYLDENQLFKIPMKLPSSLELLSLNGNKILNITKDNLPNLSNVEVLYLSQNCYHHNPC
NMPNHIGDGAFSSINNLKNLTLAANNLTSVPRNLPETLISLSLRKNRIQTINQDDFHQLI
DLEFLDLTGNCPRCFNAPYPCEPCPGGSSIHIHPYAFQRLTKLQTLILSSNSLDKMQSSW
FQNCTDLKVLHLELNFLVTEIATGDFLNHLPRLEELDLSFNYKIASYPKNINLSSNFSKL
ISLRQLRIEGYVFKEINSQDLSPLYSLCNLTVLNLATNFIKQADLMIFKQLPSLKVIYLS
ENRLSPPSNDRNPLCGSMYKDQHLPYLESSLKDSRLLSGNDNRAYEPLHNDGDDIQRLNV
KLACYSYGKTLDLSLNNIFFITPKQFKGFDDIKCLNLSGNAIGQALNGTEFASLPNLKYL
DLSYNRLDPAYDNAFKELRQLEVLDLSYNKHYFVVEGVTHNMGFIENLKYLKVLNLSYNA
IFTLTESGLNSDSLEVLKFQGNCLNILWNGVDSRYISLFKNLPNLTYLDLSSNQLRHIPS
DVYENLPLNLSFLSLSHNSLFGVNWNKLQLLKNLLTLDLSSNKLTVAPDKLYNSTKSLQK
LLLRSNRISHLPVSFFTSANRIKYLDLSDNKIKMLNRIDFPANEKLFLEVLVIKGNPFYC
TCELAPFIAWVNTSDLRIPQLATDVTCESPENEHGQSIILFDQHACTLDGVAALLSLASA
IIIFCTIFVAVTHHLFYWDMWYLYNFCNFRLNGYRSLEEQSCSFDAFIAYDTSDLAVTDW
VVNELLVHLEGKGEKQLSVCLEERDWELGMAVVENLSQSIHKSKKTVFVLTRSYVKGGTF
KTAFYMAHQKLMDENEDVILLVLLEPVLINSKYLKLRERLCSNSVLRWPKNPNSEGFFWQ
CLRNAIASNNQSRYNTIVEFT
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggcacagggaacatcagattcggcattgattttactgttcttcctctttctgctcaac
tttgttgtaacaccactcacaaccggctggattcccagaagcctcccatgtgatgtgagc
atacagaacaatggctcctcgattcagttagactgtagaagccatcgccttcaccaagta
ccacgaaacattccttccaacgcaaccagcctagatctagcatataatcagatcacaaat
atttccaattgctccttctccagcttacaaaacctaaccaaaatagatctgagggggaac
gttttacccgggaaaaacatgctcatagcaaaaggcagcttctccaccttgaaaaaacta
caagaattatatctagatgaaaaccaactcttcaaaatccctatgaaactgccatcgagt
ttggaattgctcagccttaatggcaataagattctaaatataacaaaagacaatctacca
aacctgtcaaacgtagaagtactttacttgtcacagaactgttaccatcacaacccctgc
aacatgcctaaccatatcggtgacggggcattttcaagcatcaacaatctgaagaatctc
acacttgccgcaaataatttaacttctgttcctcgaaacctgccagaaactttaatctct
ttaagtctccggaagaacagaattcaaaccattaaccaagacgattttcatcagctgatt
gatctggaattccttgacctaactggaaactgtcctaggtgtttcaatgctccttaccca
tgtgaaccctgccctggaggcagttccattcacatacatccttatgcttttcaaaggctt
acaaagttacagacgttaattctttccagcaactcccttgataaaatgcaaagcagctgg
tttcagaactgtactgacttgaaggtcctgcatcttgaactgaatttcttagttaccgaa
attgctactggagactttttgaaccatttgcccagattagaagagcttgacttgtcattc
aactacaaaatagcatcctatccaaaaaatatcaacctttcaagtaacttttccaaatta
atctccttaaggcaattacgcattgaaggctatgttttcaaagagatcaattcacaagat
ctaagtccactgtacagtctctgcaatcttaccgttcttaacctcgcaacgaacttcatt
aaacaagcagacttaatgatctttaaacaacttccatcgctaaaggtaatatatctgtca
gagaataggttatcacctccatcaaatgacagaaatcctctttgtggttctatgtacaaa
gatcaacatctcccttatttagaatctagtttaaaagattcacgtttactatctggaaat
gacaatcgggcatatgaaccccttcacaatgatggtgatgatatccaaagactaaatgtg
aagttggcctgttattcttacgggaagacattggatttgagtttgaacaatatatttttc
atcactccaaagcagtttaaaggttttgacgacatcaagtgcctgaatttgtcaggaaat
gcaattgggcaagctttaaatggtactgagtttgcatccttgcccaatttgaaatattta
gatctttcttataatcgactcgatccagcttatgataatgcttttaaagaactgcggcaa
ctggaagtgttggacttaagttacaacaaacactactttgttgttgagggtgtcacacac
aacatgggtttcattgaaaaccttaaatatttgaaagtgttgaacttaagctacaatgcc
atctttacattgacagagtcaggattgaacagtgattccttggaagttttgaaattccaa
gggaattgcctgaatatcttatggaatggggtggacagtagatatataagcttatttaaa
aatctacctaatttaacatatcttgatttatcttctaaccaactgcgtcatattccatct
gatgtttatgaaaatttaccccttaatttgtcatttttgtctttaagccataacagttta
tttggggtcaattggaataaactacagttattaaagaatctgctgaccttagatctgagc
agcaataagttaaccgttgcccctgataaactatataatagtaccaagtccctccagaaa
cttttgttgagaagtaatagaatttctcatcttcctgtaagcttcttcacatcagcaaac
agaataaaatatcttgatttaagcgataacaaaattaaaatgttaaaccggatagatttt
ccagcaaatgaaaagcttttcctggaagtattggtaataaaagggaatcctttttattgc
acttgtgaacttgcaccgtttattgcatgggttaatacttcggacctgcgcattcctcaa
ttggccactgatgttacctgtgaatcacctgaaaatgagcacggacagagcattattctc
tttgatcagcacgcatgtacactggatggtgttgcagctttattaagtttggcttctgcc
atcattattttttgcactatatttgttgcagtgacccaccatttgttttactgggacatg
tggtacctttacaatttctgcaattttcggttgaatgggtatcgctctcttgaagagcag
agctgttcctttgacgcattcattgcttatgacacttcagatctggctgtgacagactgg
gttgtcaatgaactattagttcacttggaaggtaaaggagaaaagcaactttccgtgtgt
ttggaagagagagattgggagttaggaatggctgttgtcgaaaatctttctcaaagtata
cataagagcaaaaagactgtgtttgtgctcacaaggagttatgttaagggaggaaccttc
aaaacagctttttatatggctcaccaaaaactcatggatgaaaatgaagatgtaatccta
ttggttttgttggagcctgttttaatcaactcaaagtatttgaaattgagggagaggtta
tgtagcaactctgtgttacgttggcctaaaaaccctaattctgaaggctttttttggcaa
tgcttaaggaatgcaatagcctcaaacaatcagtcaagatacaacacaattgtggaattc
acttaa
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integrated database retrieval system
