Scyliorhinus canicula (smaller spotted catshark): 119970769
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Entry
119970769 CDS
T11175
Symbol
hmgcs1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau00280
Valine, leucine and isoleucine degradation
scau00650
Butanoate metabolism
scau00900
Terpenoid backbone biosynthesis
scau01100
Metabolic pathways
scau03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
119970769 (hmgcs1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
119970769 (hmgcs1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
119970769 (hmgcs1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
119970769 (hmgcs1)
Enzymes [BR:
scau01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
119970769 (hmgcs1)
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Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
Motif
Other DBs
NCBI-GeneID:
119970769
NCBI-ProteinID:
XP_038661846
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All DBs
Position
8:complement(192116150..192187748)
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AA seq
522 aa
AA seq
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MPGSLPANAEAGWPKDVGILALEIYFPSQFVEQTELEKFDGVDAGKYTVGLGQSRMGFCS
DREDINSLCLTAVHRLMERNNLPYESIGRLEVGTETIIDKSKAVKTVLMQLFEESGNTDI
EGIDTTNACYGGTAALFNSVNWVESSSWDGRYALVVAGDIAVYATGSARPTGGAGAIAML
VGPNAPLGFERGLRGTHMQHAYDFYKPDMVSEYPVVDGKLSIQCYLSALDHCYSVYCNKY
QAQKQKEGSDARFTLQDFNYMVFHTPYCKLVQKSVGRLLLDDFLRDPNPNTQSGTFAGLE
AFRDVKLEDTYFDRDVEKAFLKASADIFKQKTQPSLMVSNQNGNMYTPSVYGCLSAILGQ
RSAQQLAGQRIGLFSYGSGFAATLYSLRVTQDATPGSALDKLVASLADLQVRLDSRKKVS
PEAFATSMKLREETHHLANQQPQSAVEDLFPGTWYLTGVDEKHRRDYARRPILENGSFEA
GLGAPHGNPTTTECAPSPAKKMPRIPATASQPATANLSNGEH
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgcctggatcacttcctgccaatgctgaagccggctggcccaaggatgttggaatcctt
gccctggaaatctacttcccgtctcagttcgtggagcagaccgagctggagaagtttgat
ggagttgacgcgggcaagtataccgtgggcctggggcagtcgaggatgggcttctgctcc
gaccgcgaggacatcaactccctgtgcctgaccgctgtacaccggctgatggagaggaac
aacctcccgtacgagagcatcgggcggctggaggtgggaacggagaccattatcgacaag
tccaaggcggtgaagactgtccttatgcagctatttgaggaatctgggaacacagacatt
gagggcatcgacaccaccaacgcctgttacgggggaaccgctgcactcttcaactctgtc
aactgggtggaatccagttcctgggatgggcgctacgcactggttgttgctggtgatatc
gccgtctacgctactgggagcgcccgtcccacaggtggtgcgggtgccatcgcaatgttg
gtcggtcccaatgctccactgggatttgagcgaggtctgcggggaacgcacatgcagcac
gcgtatgatttctacaagccggacatggtgtcagagtaccctgtggtggatgggaaactt
tcgattcaatgctacctcagtgcgctggaccattgctacagcgtttactgcaacaagtac
caggcacagaaacagaaagagggtagcgatgctcgctttactctgcaggactttaactac
atggtgttccacaccccctactgcaaactggtccagaaatctgtgggccggctgcttctc
gacgatttcctgcgtgaccccaaccccaacacccagagtggtaccttcgctggccttgag
gccttcagagatgtaaagctggaggacacatactttgaccgggacgtggagaaagctttc
ctgaaggcgagcgccgacatctttaagcagaagacacaaccctcgctgatggtctccaac
cagaatggcaacatgtacacgccttccgtctatggctgcctatccgccatcttgggccag
cgctctgcccagcagctcgctggccagaggattggtctgttctcctacggctcgggattc
gctgcgaccctgtactcactccgcgtgacgcaggacgcgacgccgggctctgcgctggac
aagctggtggcgagtctggcggaccttcaggtcaggctggattcccgaaagaaggtgtca
ccagaagcattcgccaccagcatgaagctgagggaggagacccaccacttggccaatcag
cagccccagagtgcggtggaggacctgttccccggcacgtggtacctcaccggcgtggat
gagaagcatcgccgcgactacgccaggaggcccatcctggagaatgggagctttgaggct
gggctcggtgctccccatggaaacccgaccacgactgagtgcgcaccaagtcctgccaag
aaaatgcccaggatcccggcaacagcctcacaacctgctactgccaacctcagcaacgga
gagcactga
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