Scyliorhinus canicula (smaller spotted catshark): 119971317
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Entry
119971317 CDS
T11175
Symbol
nod2
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 2 isoform X1
KO
K10165
nucleotide-binding oligomerization domain-containing protein 2
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
119971317 (nod2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
scau04054
]
119971317 (nod2)
Pattern recognition receptors [BR:
scau04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
119971317 (nod2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_NLRC3
CARD
LRR_TMOD-LMOD
NLRC4_HD2
LRR_6
WHD_NOD2
LRR_CARMIL
LRR_4
nSTAND_NTPase5
AAA_29
AAA_16
AAA_30
AAA_22
T2SSE
G-alpha
TsaE
DAP3
AAA_19
Motif
Other DBs
NCBI-GeneID:
119971317
NCBI-ProteinID:
XP_038662625
LinkDB
All DBs
Position
9:52121565..52180060
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AA seq
1052 aa
AA seq
DB search
MNADQLLKAQRHQFITILGRGSIETFESILDHLLAWDLLNWEEYEHVKSPGLLSRSSRNL
LDVVTCKGTRACELFIVVLEDVINSSQLTDLILGTYMPRERTDEPSASLSLLASQTLQKH
RPGIVRKLHGHIAAVLEHLQRYGQFSKYECDEVQLPIYTPSQQARKLLDLTKAKGDDTAQ
ILLDYIESEPRPIRPALGNVCLKYQEKLSSTLAAQSRFLTNYAGTENMCLEDIYVDCVLE
ISNTAAETGCLSFLIGLEDIFGPDGVSNKDADTVLITGEAGSGKSTSLQQMQQLWATKRA
FQSFTFIFAFSCRRLNFIDQPISFKMLLFEHCCWPDDQQDDVLQYILDHPEEIMFMLDGF
DEFKLQFTDEEKHCSPTKPTTALNLIFNLLQGNLMKNTKKVMTSRPAAVTVSLRKYLQKE
VTLKGFSREGIKMFIKKCHSSTSSAENILDFVEANSALHGLCHVPFFCWIVSKCHEQLLQ
NGSDFTHTMTDVYLLILEHFLLHFTHSSQGINEVLLSRFATILHLSKLALDGLSSCCYMF
SAAQLREAEVSEEDISLGFLVHSHSLSHACCVGNNRNYEFIHITVQCFFAALYITLNDRI
GQSTLCSLFKHKQGKTSQCFKGWPFYCHQSDDPQDGRSEAILQEAERSNLQITASFVSGL
LSCRHRNLMGKTSLVRRRSKKYKLVKKCLVKSILKHFLSIPPAFGGEKKSMHALPEFVWW
IKCIYEMQDSDLAKQAVRRLEVDHLKLTYCGIGPVECTALAYVLKHLKNPVGLQLDYNSV
GDLGIEQLIPCLDICQSIYLRGNNISDQGVSKLVERALDSCNLQKIALYHNNLTDACTQN
FAKLLKHKDNFLALRLGNNHLSASGAEVLAEGLKQNNSIQYLGLWGNKIGDAGACALAAA
LENNTSMLWLSLVGNNVGSHGARALASMLKKNTILEELCLQENNLVDEDMLHFAEGLQNN
SSLKVLKLANNRISRKGLEFIIKSLKHNVTITSVWRKSRNCRGDRTYDQSGKKIGILIKN
WKRELFDLLIFPSRLKTKLCCSAFCIMNYIYR
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgatcagctgcttaaggcacaaaggcatcaattcatcacaattcttggaaga
ggttcaatagaaacctttgagagcatccttgatcacctattagcatgggatcttctgaac
tgggaggaatatgaacacgtgaaatcaccaggacttctgtctcgttccagtcgcaatctc
cttgatgttgtaacatgtaaagggaccagagcctgtgaactttttattgtggtgttggaa
gatgtcattaacagctcgcaactgactgacttaattctggggacctatatgccccgagaa
aggactgatgaaccttcagcatcactatcattattggcttcccaaactcttcaaaaacac
agacctggcatagtgcggaaactgcatggacacattgcagctgtgttagaacatctgcaa
agatacggtcaattttcaaaatacgaatgtgatgaggttcagttgccaatatatacacct
tctcaacaggcacgaaagctgctagatctcacaaaagctaagggggatgatacagctcaa
atcctgttagactacattgaatctgaacctagacccatcagaccggccctcggtaacgtc
tgcttgaagtatcaggaaaagttgagttccacattggctgctcagtctcgatttctaaca
aactatgcaggaactgaaaatatgtgcctggaggatatttatgtggattgtgtcttggaa
atatcaaatactgctgctgaaactggctgcttgtctttccttatcggactggaagacatc
tttggaccagatggagtatcaaataaagatgcagatactgttttaatcaccggggaagca
ggaagtgggaaaagcacttcactgcagcaaatgcaacaactgtgggcaacgaaacgagca
ttccagagcttcacctttatatttgctttcagctgcaggaggttaaacttcattgatcaa
cccatttcgtttaaaatgttattgtttgaacattgctgctggcctgacgatcagcaagat
gacgtgctccaatacatcctggaccaccctgaggagatcatgttcatgctcgatgggttt
gatgaatttaaactccaatttactgatgaagaaaagcactgctctcccaccaaacccacc
acggcattgaatctgatctttaatctgctccaaggaaacttgatgaagaacacaaaaaag
gttatgaccagccgccctgctgcagtgactgtgagtttaaggaaatatctgcagaaggag
gtcactttaaaaggattctcacgggagggaattaaaatgttcataaagaaatgccacagc
agcacttcaagtgcggaaaatattttagattttgttgaggcaaattcggctcttcatgga
ctttgccatgtgcctttcttctgttggatagtgtcaaagtgccatgagcagttactgcag
aatggcagtgatttcactcacactatgactgatgtttatctgctgattctggagcatttt
ttattgcatttcacacacagcagtcaaggaattaatgaagttctactgagccgttttgcg
acaatcctccacctcagcaaattagcactggatggtttatcctcttgctgttacatgttc
tcagctgcacagctacgagaggctgaggtatctgaagaggacatttctttaggcttcctc
gtccatagtcatagtctctcacatgcatgttgtgtcggtaataatagaaactatgagttt
attcacatcactgtccagtgtttctttgcggcactgtacatcactttaaatgataggata
ggacaatctactctttgctcattattcaaacacaaacaggggaaaacatcccaatgcttt
aagggttggccattttattgccaccagtcagatgacccacaagacgggagaagtgaagct
atcttacaggaggcagagagatcaaatctccaaataacagcgagctttgtttctgggctt
ttgtcctgtaggcacaggaacctgatggggaagacttctctcgtccggaggcgatccaag
aagtacaaactggttaaaaaatgtttagtaaagagcatactgaaacatttcctatctata
cctccagcttttgggggcgagaagaaaagtatgcatgctttgccagaatttgtatggtgg
attaaatgcatttatgaaatgcaggacagtgatttggccaaacaagctgttcgtagactg
gaggtggatcacttgaagttgacctactgtggaatcgggccagttgagtgcactgctctt
gcttacgtcctcaaacacttgaaaaatcccgtgggtttacagctggattacaattcggtc
ggtgatttgggaattgaacagctcattccctgcttggacatttgccaatctatttatctc
cggggaaataatatttctgatcaaggagtctccaaactggttgaacgagcccttgacagc
tgtaatttacaaaagattgcattgtatcacaacaatttaactgatgcgtgcacccagaat
tttgcaaagcttcttaaacataaggacaactttctcgcattaaggctaggcaacaaccac
ttatcagcttctggagcagaagtgctagcggaaggtttaaaacagaacaactctatccag
tacttgggactttggggaaacaagattggagatgctggtgcttgtgcattagcagcagct
cttgagaataacacaagcatgttatggctaagtcttgtaggcaacaatgttggcagccat
ggtgccagagcattggcctcaatgctgaaaaagaacaccatacttgaggagctttgtctt
caggagaataatttagtggacgaggatatgcttcactttgcagaaggacttcagaacaac
tcaagcttgaaggttctcaagctagctaataatagaatcagcagaaaaggattggagttt
attatcaaatccctgaagcacaatgtcactattacatctgtatggaggaaatcacgtaac
tgcagaggagatcgaacatatgaccagagtggaaagaagattggcattttgatcaaaaac
tggaaaagggaactatttgaccttttaatatttccctcacgtttaaaaacaaaactgtgc
tgtagtgctttctgtatcatgaactatatttatagatga
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integrated database retrieval system
