Scyliorhinus canicula (smaller spotted catshark): 119973412
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Entry
119973412 CDS
T11175
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04010
MAPK signaling pathway
scau04260
Cardiac muscle contraction
scau04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119973412
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
119973412
04261 Adrenergic signaling in cardiomyocytes
119973412
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scau04040
]
119973412
Ion channels [BR:
scau04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
119973412
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GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
MCP-like_PDC_1
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
119973412
NCBI-ProteinID:
XP_038667399
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Position
11:137251491..137978049
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AA seq
1121 aa
AA seq
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MAACRSSVCLIAVIQLCLMLSCTSQESFPQANEIRSWAEKMKEDLIKLVRASSEVEQMEQ
IYLKNRQYYTVETNNARRLVESAAREIEKLLSNKVEALKRLADSAENSQAMHAWKEEFGD
NDVIYYNAKDDLMSVLKRERGFTKFKSERNESRPRIKPDFQFNQAFRRRVDFNHTAVHIP
TDIYEGSTIVLNELDWTATLDSVFKLNKDKDPTLMWQVFGSATGLARYYPASPWVDLTKT
ANRIDLYDVRRRPWYIQGAASPKDMLILVDVSGSVSGLTLKLIRTSVSEMLETLSDDDYV
NVVSFNNQAKSVSCFRHLVQANVRNKKVLKDAVNQIQAKGITDYKKGFAFAFEQLQNFNV
SRANCNKIIMLFTDGGEERAQEIFTTYNQEKKVRVFTFSVGQHNYDKGPLQWMACTNKGY
FFEIPSIGAIRINTQEYLDVLGRPMVLADTNEKQVQWTNVYLDALELGLVITGTLPVFNL
TKDASGNQNQLILGVMGIDVSLADVQRLTPRYTLGPNGYYFAIDPNGYVLLHPNLQPKLI
GVGIPKINLRERRPGTQNPKSQEPVTLDFLDAELENEIKVEIRHSMIEGQNGERTLDTLI
KSYDERYIDKGTRTYTWTLVNSTDYSLALVLPPYGFHYIKAKLDEVITQAKPKHKDLESI
MPDNFETTGYVYLAPREYCNGLPPSSNNTAFLENFINFIDRQTPNSPDCKTDLINNLLLD
AGFTSELVTNYWTKQNPAGVLARFVATGGGITRIYPKSAGEEWTENPETYEASYYKRSLN
NNIYIFTAPYINKTWDGMQSSAESGIMVSKAVEIRIDGKLLKPAVVGVKIDVNAWMENFT
KVASKSKCYGEICDCTKNSKHFDCVILDDGGFLLMSNQDEYIGKIGKFFGEIDPSLMKRL
LNTSLYAFNKSYDFQSVCDPETETKAAAGLRSVYVPSIIEILNIGWWATSAAWSLLQQLL
ISLTIPHFLEAVDADSEDFSEPLSKSSCITEQTQYYFYDNESSFQGLVDCGNCSRLYHAE
KLSKTNLVFILVESKPTCQSCDSKPLMQAEQKSDGPDPCILAQNPRHRKGPDVCFDSDER
DEPICTTSRASAVASARLFILLQVLMWCGGRMILSVAVALV
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttgcaggagctcagtctgtctaatagcagttatacagttgtgcctgatgcta
tcttgtacatcgcaagagagctttcctcaagctaacgaaatacgatcatgggcagagaaa
atgaaggaagaccttataaagttggtacgtgcctctagtgaagtggaacagatggaacag
atatacttaaaaaacagacaatactacacagttgagacaaataatgctcgacgtttggta
gaaagtgctgctagagaaattgaaaagcttctaagcaacaaagtggaagccctgaagaga
cttgcggattctgccgagaattctcaggcaatgcatgcttggaaagaagaatttggggat
aatgatgtgatatactacaatgcaaaagatgacctaatgagtgttttaaagcgagaacga
ggattcacgaagttcaagtctgaaagaaatgaaagccgtccaaggatcaaaccggatttt
cagttcaaccaagctttccgacgccgtgtggacttcaaccacacagctgtccacatcccc
acagacatctacgagggctcgactatcgttttaaatgagctggactggactgcaacgctg
gatagcgtttttaagttaaataaagataaagacccgacattaatgtggcaggtgtttgga
agtgcaaccggcctggctagatattatccagcatctccatgggtggatctaaccaagact
gccaacaggattgacttgtatgatgttcggagacggccttggtacattcagggagctgct
tcacccaaggacatgctcattcttgtagatgtgagtggaagcgttagtggactaacactg
aagctgattcggacatcagtctctgagatgctggaaacactttctgatgacgactatgtg
aatgtggtttctttcaacaatcaagcaaaatctgtcagctgcttcaggcatcttgtgcaa
gccaatgtcaggaacaaaaaggtcctcaaagatgcggttaaccaaatacaggccaaagga
atcactgactataaaaaagggtttgcatttgcttttgagcaattgcaaaatttcaatgtg
tcccgagctaattgcaacaagataattatgctatttacagacggtggtgaagaaagagcc
caggaaatctttacaacatacaaccaggagaaaaaagtgcgggtattcaccttttcagtt
ggtcaacataactatgataaaggaccattacaatggatggcctgcaccaataaaggctac
ttttttgaaatcccctccattggagcaatacgtattaacacacaggaatatttggacgtg
cttggaagaccaatggttttagctgacacaaatgaaaaacaagttcaatggaccaacgtg
tacctggatgcattggaactcggtcttgttatcacaggaacactgcccgtcttcaactta
actaaagacgctagtggaaaccagaatcaattgattcttggagtgatgggcattgatgtg
tcacttgcggatgtgcagagactcacaccacgttacactctgggccccaatggttattac
tttgcaattgaccctaatggttacgtattgcttcatccaaacctccagccgaagttaatt
ggtgtagggatcccaaagattaatttaagagagagacgccctggtacacagaatcctaaa
tctcaggagcccgtcactttggattttctagatgctgaactggagaatgaaattaaagtg
gagattcggcacagcatgatagaagggcaaaatggtgagaggactctcgatacactgatc
aaatcctatgatgagaggtatattgacaaaggaacccggacatacacatggactctggtg
aatagtacagattacagtttggcactggtccttccaccgtatggtttccactacatcaaa
gccaaactagatgaggttatcacccaagcgaaacccaaacacaaggacttagaatcaata
atgcccgataacttcgaaaccacaggatatgtgtatctcgccccaagggaatactgcaat
ggactgcctccttcaagcaacaacacagcattcctggagaactttattaattttattgac
cggcaaactccaaattctccagactgcaaaactgatctgatcaataacctgctcctcgat
gctggatttacaagtgaacttgtgacaaattactggactaaacaaaacccggcaggagtt
ctggctagattcgtagcaactggtggtggaattacaaggatttatcccaaaagtgctgga
gaagaatggacagagaatccggagacatatgaagcgagctactacaaaaggagcctaaac
aacaatatttatatcttcactgcaccttacatcaacaaaacttgggatggaatgcagagc
agcgccgagtctggtattatggtgagcaaagctgttgaaattagaattgatggcaaactt
ctgaagcctgcagttgttggagtaaaaattgatgtaaatgcctggatggagaacttcacc
aaagtagcaagcaagagcaagtgttacggagagatctgtgactgcacaaagaacagcaag
cattttgactgtgtcatattggatgacggtgggttcctgcttatgtcaaaccaggatgaa
tatattggaaagatcggcaagttctttggcgagattgacccaagtctgatgaaacgcctt
ctgaacacatcgctatatgccttcaacaaatcctacgattttcagtctgtgtgtgatcca
gaaacagagaccaaggcagcagcgggacttcgctcggtctacgttcccagcattatcgag
attttgaatataggttggtgggcgacaagtgcggcatggtccttactgcagcagctgctc
atcagccttaccatcccacacttccttgaagcagttgatgcagactctgaggatttctct
gaacctctatcaaagtccagctgcatcactgaacagacgcagtattacttttatgataat
gaatcctccttccaagggcttgtggattgtggtaactgttcaaggctttaccatgcggag
aagctctccaagacaaacctggtgttcatactggtggagagtaagcccacatgccaatcc
tgtgactcaaagccccttatgcaggcagaacaaaaatctgatggacctgacccctgtatt
ttggctcagaatcccaggcacaggaaaggccccgatgtatgctttgattcagatgagcgt
gatgagcctatatgcacaacgagtcgtgcctctgccgtggcgtcagctcgtctcttcatt
ttactgcaagttttgatgtggtgcggagggaggatgattctgagtgtggcagtggctctc
gtctga
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