KEGG   Scyliorhinus canicula (smaller spotted catshark): 119974665
Entry
119974665         CDS       T11175                                 
Name
(RefSeq) lysine-specific demethylase 2B-like isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
scau  Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:scau00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    119974665
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:scau03000]
    119974665
   04121 Ubiquitin system [BR:scau04121]
    119974665
   03036 Chromosome and associated proteins [BR:scau03036]
    119974665
Enzymes [BR:scau01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     119974665
Transcription factors [BR:scau03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    119974665
Ubiquitin system [BR:scau04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     119974665
Chromosome and associated proteins [BR:scau03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    119974665
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     119974665
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like F-box LRR_4 PHD TrmE_N
Other DBs
NCBI-GeneID: 119974665
NCBI-ProteinID: XP_038669668
LinkDB
Position
12:110870037..111209434
AA seq 841 aa
MALSPDDEDYDTSQSRASTRLKPRSAPSSGPKLLVHKSTSGARRRRTRCRKCEACLRSEC
GECHFCKDMKKFGGPGRMKQSCIKRQCIAPVLPHTAVCKICGEAGKEDNVVDEAEKFNAS
LMECSICNEILHPGCLKVEESEGLINDELPNCWECPKCNQEGKTGKKRGPGFKFASNLPG
SLLKEFKEGEDGGRRKSEDLGRPKMEEYHPNRRKSDDGLGLKRRKEKDLPTDLSPRKKLR
GGKDDKLQKRKEKLSNNRIKRGKIGGDQPALKNLTDFEEQAAQLAGKEHNQAYEDGEIDG
QPPTSSSRKKGKQVDKAQPKSPQRTKGFGEEEESAPVEQSPVLPSSAETHTSKRKTTPNS
EECTKVNHLERSEDAERIERIRQMMKRVNRNEATSSSSSSDSGSDSSSGSESSLQRSAGS
SGGSSPRSVAKADNQRSKLRRLSNDIFSEEDDEEEEDEDEENARNIKSNSFLASKDRENN
YYSLRGESIQKNSFRTVEVSLKKKNGPSNQLCHKGLGGLARPQILSKLPVQSPPKPFQME
RHVVRPPPDSPEPDSLPLAGGSEHVMQREVWLAIFRYLSHKDLCICMRVCKTWSKWCCDK
RLWITINLSGCISITPTMLSGIIRRQPIILDLSWTNISKKQLSWLINKLQNLKILVLAGC
IWSAISALCTASCPLLRMLDLRWVADLKDSQMKELLSPPTDCRVGQNHNQSKLWNLTEFQ
LAGLDITDCSLALMTRHMPMLNKLDLSQCSHVTDQSIVLLTAPGSSTRETLSEINLSGCH
RITDQCLLLLKHCPNLTRIDLRNCKLISPQACQQLVEGLANVAPFELLEDKLLKRSLQLT
K
NT seq 2526 nt   +upstreamnt  +downstreamnt
atggcactgagtcctgatgatgaagactatgacacctctcagtccagggcctcaacaaga
ctaaaacctcgatctgccccttcatcaggacctaaacttcttgtccataaatcaacaagt
ggtgcacgcagacgcaggacacgatgtcgcaaatgcgaagcctgcttacgctcagagtgt
ggcgaatgccacttctgcaaagacatgaagaaatttggaggccctggcagaatgaagcag
tcctgtatcaagaggcagtgtattgctcctgtgttaccacacactgcagtctgcaagatc
tgcggtgaggcaggaaaggaagacaatgtggtggatgaagcagagaaatttaatgctagc
ttaatggaatgctccatctgcaatgaaatcttacacccaggatgtttaaaggtggaagag
tctgaaggacttataaatgatgagttaccaaattgctgggaatgtccaaagtgtaatcag
gaaggaaaaacaggcaaaaagagaggccctgggtttaaattcgcctccaatcttcctggg
tctctcttaaaggagtttaaagaaggtgaagatggagggagacggaaatctgaagatctt
ggacgtcccaaaatggaggaatatcatcctaacaggcggaaatctgacgatggtctgggg
ctcaaacgaagaaaggaaaaagatctaccaactgatttgagcccaaggaaaaagctaaga
ggaggaaaggatgataaacttcaaaaaagaaaggaaaagttaagtaataataggataaag
agggggaagataggaggggaccagcctgccttgaagaacctgaccgactttgaggagcag
gcagctcagttggcagggaaggaacataaccaagcctatgaagatggagagatcgacggg
cagcctccaaccagctccagcaggaagaagggaaagcaggtggataaagcccagccaaag
agcccacagagaaccaagggctttggggaggaggaagaaagtgcacctgtagagcaatca
cctgtactcccctccagtgcagagacacacacttcgaaacggaaaacgactccaaattct
gaagaatgtacaaaagtaaatcacctagaaagatcagaagatgcagaaagaatagaacgg
atacgacaaatgatgaaacgtgtcaaccgaaatgaagcaaccagctctagctctagttct
gattctggctccgattcaagttctggatcagaatccagcctacagagatcagcaggaagc
agtggtggatctagcccaaggtctgttgcaaaggcagataatcaaaggtccaagctcaga
aggctgtctaatgatatttttagtgaggaagatgatgaggaagaagaagatgaggatgaa
gagaatgcaagaaatataaaaagcaattcatttttggcctcgaaggatcgagaaaataac
tattattccctgagaggagagagtattcaaaaaaactcctttaggacagtggaggtttca
ttgaagaagaaaaatgggccatccaatcagctttgtcacaagggtctaggtggtttggcc
cgtcctcagatactaagcaaactccctgtgcaatctcctcctaagccatttcaaatggag
cggcatgtggtgcggcctccacctgatagccctgaacctgattctctgccattggctggt
ggatcagaacatgtgatgcaacgggaggtgtggctggcaatattcaggtacctcagccat
aaggacctatgcatctgtatgagagtgtgcaagacctggagtaaatggtgttgtgacaag
agattgtggatcacgattaacctgagtggctgcatatcaatcactccaactatgctgagt
ggaatcatcaggagacagcccatcatactggaccttagctggacaaacatctccaaaaag
caactcagttggctcataaacaagttacaaaatttgaaaatactggtactagcaggttgc
atttggagtgcaatctctgcgctttgtacagcaagttgcccccttctacgtatgctcgat
cttcgctgggtggcggatctcaaagactcccagatgaaagagttgctttccccacctaca
gattgcagagtaggtcagaaccataatcaaagtaaactgtggaacttgacagaatttcag
ttagctggtctggacatcaccgactgctcactggctttgatgacccgccacatgccaatg
ttgaacaaactggacctcagccagtgcagccatgtgactgatcagtcgattgtcctcctg
acagcacccggatcttctacgcgcgaaacactgagtgaaattaacctttcaggttgccat
cgaataacggatcagtgcctattgctgcttaaacactgcccaaaccttactcgaatcgac
cttcggaattgcaaactgatttctccccaggcctgtcagcaacttgtggaagggctggca
aatgttgccccctttgaactcttggaagacaaattattaaagagaagtttacaattgaca
aagtag

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