KEGG   Scyliorhinus canicula (smaller spotted catshark): 119976117
Entry
119976117         CDS       T11175                                 
Name
(RefSeq) class I histocompatibility antigen, F10 alpha chain-like
  KO
K06751  MHC class I antigen
Organism
scau  Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04144  Endocytosis
scau04145  Phagosome
scau04218  Cellular senescence
scau04514  Cell adhesion molecules
scau05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:scau00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    119976117
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    119976117
   04145 Phagosome
    119976117
  09143 Cell growth and death
   04218 Cellular senescence
    119976117
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    119976117
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:scau04147]
    119976117
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:scau00537]
    119976117
Exosome [BR:scau04147]
 Exosomal proteins
  Proteins found in most exosomes
   119976117
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:scau00537]
 Antigens
  119976117
SSDB
Motif
Pfam: C1-set MHC_I Ig_3 Ig_2 C2-set_3 Psg1 I-set C2-set_2 LRRC37AB_C DUF202
Other DBs
NCBI-GeneID: 119976117
NCBI-ProteinID: XP_038672224
LinkDB
Position
13:39555133..39571521
AA seq 239 aa
MWYVEVTEDGSIRRSMRFGFDGKDFISLEPDTKRWVATNHIAVKTKEKWDSDQSWNSYWE
TYLQGIFVQHLNRYLQAGKEYFGRKVQPEVFISRSEANSQYKPLTLSCLVTGFYPVDIEV
TWLRNGEVMSETQSSGLRPNHDGSHQIQKEIEINAGDEDQYSCQIEHSSLAEPKLHQWEI
PENSGGRTHLEIIIGSVIIVLAVMFGIIGIIIWKRHQRDSPSVIYTTAHTSDVPVPEAS
NT seq 720 nt   +upstreamnt  +downstreamnt
atgtggtatgtcgaggtcactgaagacggctccattcggagatcgatgaggtttggattt
gatggaaaggactttattagtttagagccagacacaaagagatgggtcgcaaccaatcac
atcgcagtgaagactaaagagaaatgggattcggatcaatcctggaacagctactgggaa
acatatcttcaaggaatatttgttcaacatttgaacagatatttacaagctggaaaggaa
tattttggacggaaagttcagcctgaagtcttcatctccagaagtgaggccaatagtcag
tacaagccgctcactctctcctgcctggttactgggttttatcctgtagacatcgaggtg
acctggctaaggaatggagaggtaatgtctgagacacaatcctcggggcttcgaccgaac
cacgatgggagccatcagatccagaaagagattgaaataaatgctggggatgaggatcaa
tactcctgtcaaattgaacacagcagcctggcagagcccaagctccatcagtgggaaatc
ccggaaaacagtgggggacgcacccatcttgaaattataatcggatcagtcatcattgta
ctggctgttatgttcggaataattggaataatcatctggaaaagacatcagagagattca
ccgagtgtgatctacacaacagctcacacatctgatgtccctgttccggaagcttcttaa

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