Scyliorhinus canicula (smaller spotted catshark): 119976123
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Entry
119976123 CDS
T11175
Name
(RefSeq) H-2 class I histocompatibility antigen, Q9 alpha chain-like isoform X1
KO
K06751
MHC class I antigen
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04144
Endocytosis
scau04145
Phagosome
scau04218
Cellular senescence
scau04514
Cell adhesion molecules
scau05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119976123
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119976123
04145 Phagosome
119976123
09143 Cell growth and death
04218 Cellular senescence
119976123
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119976123
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scau04147
]
119976123
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
scau00537
]
119976123
Exosome [BR:
scau04147
]
Exosomal proteins
Proteins found in most exosomes
119976123
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
scau00537
]
Antigens
119976123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
MHC_I_3
Ig_2
Ig_3
Psg1
DUF6172
MHC_I_2
LapA_dom
Motif
Other DBs
NCBI-GeneID:
119976123
NCBI-ProteinID:
XP_038672229
LinkDB
All DBs
Position
13:complement(52979427..53048437)
Genome browser
AA seq
353 aa
AA seq
DB search
MLRLILLIITGGVSAVPHSWLVMYTAITGVPELPEFFVVAHVDGVEVHYYDSHEKKLLPR
QRWMEESEGPDYWERQQRILRSAEQVQKTNIKTAMERTNQTSGIHVLQVLYGCELGEDSS
VRGFHQHGWDGRDSIGFDTESMVWVAAVPWTLVTKIKWDRDPGFNQGKKRYLEGTCVQWL
KTYLEQGKRKLKPVPPQVFINVDKATDTNPDQLSCLVTGFYPGQIEVTLLRNGEPITDTF
STGVLPNHNDSYQLRRWSQINPEDGATYSCQFEQGEKGAETRDWDGTFRGTPRSPEGTNL
GLIIGIVVAVGALIAVAIGVAMWKEKGGKNRAGYSSGIAIEKEKSSSNSSVQA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgctgagattaatattactgatcattactggaggggtctcagcagttcctcactcttgg
cttgtcatgtacactgctatcaccggggtacccgagctgccagagttttttgttgttgcc
catgttgacggtgttgaggttcactattatgacagccatgagaagaagctgcttcctcgg
caacgatggatggaggagagcgagggacccgattactgggagcgacagcaaagaatcctg
cggagcgctgagcaggttcagaaaaccaatattaagacagccatggagcggactaaccag
accagcggaatccacgtcctccaggtcctgtatggctgtgagctgggggaggacagcagt
gtccggggcttccatcagcatggctgggacggacgggacagcattggcttcgataccgag
agcatggtgtgggttgcagcagtaccctggacactggtcaccaagatcaagtgggatcgg
gaccctggcttcaaccaagggaagaagcgttacctggagggaacctgtgtccagtggctg
aaaacatacctggagcaggggaagaggaagctgaaacccgttcctccccaagtgtttatt
aatgtggacaaggcgacagataccaatccagaccaactctcctgtctggtcacgggattt
tacccgggtcaaatcgaagtcactcttctgagaaatggtgagccaatcacggacacgttt
tccactggggtgttgcccaatcacaatgacagctaccagctccggagatggtctcagatc
aacccagaggatggagcaacctattcctgtcagtttgaacagggtgagaaaggagcggag
accagagactgggacggaacattccgagggactccgagatctccagagggaacaaatctc
ggtttgattattggaattgttgttgctgtcggcgctctgattgctgtggctattggtgtg
gctatgtggaaggagaaaggaggaaagaacagagctggttacagttcaggaattgccatt
gagaaagaaaaatcatcctcaaactcatcagtccaggcctga
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