Scyliorhinus canicula (smaller spotted catshark): 119978991
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Entry
119978991 CDS
T11175
Symbol
ints1
Name
(RefSeq) integrator complex subunit 1
KO
K13138
integrator complex subunit 1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scau03041
]
119978991 (ints1)
Spliceosome [BR:
scau03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
119978991 (ints1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
INTS1_INTS2-bd
INTS1_RP2B-bd
INT1_R3
INTS1_R4
UNC45-central
HTH_RNase_II
Motif
Other DBs
NCBI-GeneID:
119978991
NCBI-ProteinID:
XP_038676888
LinkDB
All DBs
Position
15:48798443..48927957
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AA seq
2199 aa
AA seq
DB search
MNRPKAVAIRRPSSAKPSGHPPPGDFIALGSKSQASDAKASGALLKPAQTGLQSDRKREG
SSTMAPTSGLSKRPKISSTPPLSALGRLAEAAVAEKRAISPSIKEPSVIPIEVPPATLLD
EIEAAEMDGNDDCIEGLLCGAVKQMKLNRVKPDTTLFLSLMYLAKIKPNIFATEGVIEAL
CSLLRRDASINFKAKGNSLVSVLTCNLLMAAYEEDENWPEIFVKVYIEDSLGERIWVDSP
QCKTLVENIQTAFGTKMPPKSMLLQADGGKIGSDLSAGGSPHPSTTDDDDNQTELLIAEE
KLSPDVESGQVMPRYEDLAESVEDYIIDMLRDQLNRRQPMDNVSRNLLRLLTTTCGYKEV
RLMTVQRLEMWLQNPKLTRPAQDLLMSVCTNCSTHGTEDMEVMSNLIKIRLKPKVLLNHY
MLCIKELLNAHRDNLGTLVKFVIFNELSNARNPNNMQVLYTVLQHNSELAPKYLAMVFQD
LLTNKDDYLRASRALLREIIKQTKHEINFPSFCLGLMQERKEQTYLEMEFKERFVIQVTD
LLTLSMMLGITAQVKEAGLAWDKGEKKNLEGLRSFQTQIATIQRDAVWWLHTVVPTICKL
NPKDYIHCLHKVLFTEQPETYYKWDNWPPEGDRNFFLRLCSEVPLLEDTLMRILVIGLSR
DLSLGPADAMELADHLVKRAASVQADDLDVLHVERIQLIDAVLNLCTYHHPENIQLPPGY
QPPALAISSLYWKAWLLLLVVNAFNPQNIGLAAWEGYPTLKMLMEMVMTNNFSYPQCTVT
DEETRNDMISRELQMSQREKQEILAFESHLAAASTKQTITESNSLLLSQLTSLDPQGVPR
RPPPQVLEQLKSLNQSLHLGHLLCRSRHPDFLLNIIQRQASSQSMPWLADLVQSSEGSLD
VLPVQCLCEFLLHDAADEVTSTEEEDEGESKEQRAKKRQRQQKQRQLLGRLQDLLLGSKA
DEQTTCEVLDYFLRRLSSPQVASRVLAMKGLCLVLTDSESSLRDAEEREQMLEEDSSDGE
PLPGYQWLLRDLPKLPLFSSVCNMTSLALQQAIHVETDPQTISAYIIYLSQHAPVEEQAQ
HNDLALDVARLIVERSTIMTHLFAKHAYRTECESVLVALIAIFSRYVKRMRKTKEDEEVY
SWSESQDQVFLRWTTGETATMHILVVHAMVILLTLGPPQGESDFYHLLDVWFPERKPLPT
AFLVDTSEEALLLPDWLKLRMIRSEVSRLVDAALQDLEPQQLILFVQSFGIPVSSMSKLL
QYLDQAVSHDPQTLEQNIMDKNYMAHLVEVQHERGATGGRTFHTLLTASLPPNMENADLS
RQSSIRTTPQCPIRIRRPTQIPVIGVDEDLASLFLQLFPMNPDPRWKSSNTRSISLMLQH
ALAQELSRVYQGKVEETGIAIRLLQAISALLNSPHSGAFVLSMHRNYVISCPLIRQLHQY
QRNMPEDSAAVSLFYNVVMQMRTWLENPAVEEGPLRALLKSLAAQCSLKHRMADVRAGFR
HLAEHLTYRQDQELIDSAVRGIILALKAGEKCNVEPELKARVLKGLIEMRSPYLEELLTL
VLTANLETDTTQSGTDPVALITRLLQQEGEESGIKMEIDGDSAEKLKPVSASGLFIDWSE
LLDPEVISCCPDQQQRLLFADHKVTSQPGLQQLSFRPYLLAVLIHQSNWTTVHRCISILL
SKHGELRLDPTACLDFLWACVHIPRIWQGRDQRTPQKHTEEYVLRLKKAELISLVDIILS
ESEVRNRNGSHAKKSAEDVTGTLIQSRLPLLLSCCHGNLDNVKKVTEYLISCIKQWGDSS
VMGKRCQNLLLQIYFHVPEVIRHVNLPDSVLSSDGTADGSTCKLDALVHRLLTLLADTSD
SKMSLNRMADANMACRKLSVAHPVLLLRHLPMIAALLHGRVHLNFQEFRQQNHLTFFQHI
LGIMELLQPYLFQSEHQGAMQDCLLSFILLLQNYGKFSRLIASFINKCVHFIHKFITYNA
AAAVPFLQKHSDVLHYLSREYPEMALLKSLLAGLTLPTRGGPVEENAEDEDGEDEAPGSL
PLVSFSAITPLTSAEVAPYLQKIARGRALEDILEVLTDIDEMSKRRVEVLSFFTNDLQRL
MSSPEELSRNAAFVLAMRSIQSNPRTATDFLSTFMYCLGCGNYDVVQTALKNLPEYTLLC
QEHAGVLLHKAFLVGMYSQLDTSPQIAEAMKVLHMEATT
NT seq
6600 nt
NT seq
+upstream
nt +downstream
nt
atgaaccggccaaaggctgtggcaatccggcgcccaagcagtgccaaacccagtggtcac
ccaccccctggggattttatagcgctgggttcaaagagccaggcgtctgatgccaaggca
tcaggagcactgctgaagccagcacagacaggactgcagtccgataggaaacgagaggga
tcatcgaccatggccccgacctctggcctctcaaaacgcccaaagatctcctcgactccg
ccgctgagtgcacttggacgtctagcagaggctgcagtcgcagagaaacgggccatatcg
ccttcgattaaagagccatctgtcataccaattgaagttcccccagcaacgctgctagat
gaaatagaggctgcagaaatggatggaaatgatgactgcatcgaagggttgttgtgtgga
gcagttaaacagatgaagctgaaccgagtgaagccagacaccactctgtttctcagcctg
atgtacttggccaaaatcaaacccaacatctttgcaacagagggtgtcatcgaggcgttg
tgcagtctgcttcgacgtgatgcctccattaatttcaaagccaaggggaatagcttggtg
tctgtactcacttgtaatctcctcatggcagcctacgaagaagatgaaaattggcctgaa
atctttgtcaaggtttacattgaggattcacttggagaacgtatctgggtggacagtccc
cagtgtaaaacgcttgttgagaacattcaaactgcttttggcacaaagatgcccccaaaa
agcatgctgcttcaggcagacggcggcaagattggcagcgaccttagtgcaggtgggagt
ccacacccttctaccacagatgatgatgataatcagactgagctgcttattgcagaagag
aaactgagtccagacgtagagtcaggccaggtgatgcccagatatgaagatctggccgag
agtgtagaagattatattatagacatgcttcgcgatcagctcaatcgccgccagcccatg
gataacgtctcacggaacttgctgcgattactcaccactacctgtggctataaagaagtc
cgtctgatgactgttcaacggctggagatgtggctgcaaaacccaaagctgacccgccca
gctcaggacctgctgatgtcagtatgcaccaactgctctacacatgggacagaggacatg
gaggttatgtcgaatctcatcaaaattcgcctgaagcctaaagtgttgctgaaccattac
atgctgtgcattaaagaattgctgaatgctcaccgagataacctgggaacacttgtgaag
tttgtgatttttaatgaattgtcgaatgcacggaacccaaacaacatgcaggtcctctac
acagtactacagcacaactccgagctggcccccaagtatctggccatggtgtttcaggac
ctactcaccaataaagatgattatcttcgtgcatctcgagcactcctgcgggaaattatt
aaacagacaaaacacgagattaacttcccgtccttctgcctgggcctgatgcaggagcgg
aaggagcagacgtatctagaaatggagtttaaggagcgctttgtgatccaggtgacggac
ctgcttaccctgtcgatgatgctggggattacagctcaagtgaaagaagcggggcttgcc
tgggacaaaggcgagaagaagaatctggaaggactccgttcatttcagactcagattgca
actatccagcgagatgccgtgtggtggcttcacactgtggttcccaccatctgcaaactc
aatcctaaggattacatccattgtttgcataaggtgctcttcactgaacagccagagaca
tactacaaatgggataactggcctccagagggtgacagaaatttctttctgcggctgtgc
tcggaggtcccactcctggaggacactctgatgcggatcctagtcattgggctgtcacga
gacctgtctctggggccggctgatgccatggaacttgctgaccatctggtgaaacgtgct
gcttcggtgcaggctgacgacctggacgttcttcatgtggagaggattcagctaattgat
gcagtactaaacttgtgcacctatcatcaccctgaaaatattcagctgccaccagggtat
cagccccctgctctggctatttcatccttgtactggaaggcttggctgctcctgttggtt
gtgaatgcttttaacccgcaaaatattggtttggctgcgtgggaaggctacccaaccctg
aagatgctgatggaaatggtgatgacaaacaacttctcatacccacaatgtactgtgacc
gacgaggagacccgaaatgacatgatcagtcgcgagctgcagatgtcgcagagagagaag
caggagatcttggcctttgagagccacctggccgccgcatcaacaaagcaaaccatcact
gagagcaatagcctgttactttcgcaactgaccagcctcgacccacagggagttcctcgt
cggccacctccacaggttctcgaacagctgaagagcttgaatcagtctcttcatcttggg
cacctcctgtgccggagtcgtcaccctgacttcctgctaaatattattcagcgacaggcc
tcatcccagtccatgccctggttagcagatctggtacagtctagtgaaggatccttggac
gtgttgccggtccagtgcctgtgtgaattcctgctccatgacgcagccgatgaggtgacc
tccacagaagaggaagacgagggtgagagcaaagagcagcgagccaagaaacgacagagg
cagcagaaacagcgacagctcctgggccgtctgcaggacctcctcctgggttccaaagct
gacgagcagaccacctgtgaagtgctggattacttcctgcggcgcctgagctccccacag
gtggcttcacgtgttctggccatgaagggcttgtgtctggtcctgactgactctgagagc
agcctgcgagatgcagaagagcgagaacagatgttggaagaggactccagcgatggggag
ccactccctggatatcagtggctgctgcgggatcttcccaaactacctctcttcagcagt
gtctgtaacatgacatccctggcactgcagcaggccattcatgtggagactgatccccag
accatcagtgcctatatcatttatttgtcacaacatgcaccagtagaggaacaggctcag
cacaacgatcttgctctggacgttgctcgcttaatcgtcgagcggtccaccatcatgaca
cacctctttgccaagcatgcctacaggaccgaatgcgagtccgtgctggtggcgttgatc
gcgatcttctcacggtatgtgaagcggatgcggaagaccaaggaagatgaggaggtgtat
agctggtctgagtcccaggaccaggtgttcctgcgctggaccactggggagactgccacc
atgcacatcctggtggttcatgccatggttatcctcctgacgcttggaccccctcaaggt
gagagcgacttctaccaccttcttgacgtctggtttccagaacgaaagccgctccctaca
gcattcctggttgacacctccgaggaagctctacttcttcctgactggctgaaacttcgc
atgattcgctcagaagtgtcccgactggtggatgcggctctccaggacctggagcctcag
caattgatcctgtttgtccagtcctttggaatcccggtctccagcatgagcaaactcctg
caatacctggaccaggcggtgtcccacgatccccaaacacttgaacagaacatcatggac
aaaaactacatggcacacctggtggaagttcaacatgagagaggagcaactggtggacgc
accttccacacgctgctcactgcatccctgcctccgaacatggaaaatgcagacctgagt
agacagagctcgatccgaacaacaccgcagtgccccatccggattcgaagaccgacacag
attcctgtaattggggtagatgaagacttggctagccttttccttcagcttttccccatg
aaccctgacccaaggtggaagagctcaaacacacgctcaatctctctgatgctgcagcat
gctctagcccaggagctgagcagagtttaccagggaaaggtggaggagactggaatcgcc
atccgattacttcaagctatctctgcactgctgaactccccgcacagtggagcctttgtg
ttgtcgatgcataggaattatgtcatctcctgtcccttaatcaggcaactccatcagtat
cagaggaacatgccagaggactctgccgccgtatccttattctacaatgtggtgatgcag
atgcggacatggttggagaatccagcggtagaggagggcccacttcgagcattactgaaa
tccctagctgctcaatgctctctgaagcacagaatggctgacgtaagagctggcttccgg
cacctggcagaacatctgacctatcggcaggaccaggagctgatcgattcagcagtgcgg
ggaataatattggctctgaaagctggagagaagtgcaatgtggagccagaactaaaggca
agagtattgaagggtttaatcgagatgcgatctccctacctggaggaactcctgaccctt
gtcctcactgccaacttggaaacagacacaacgcagtctggtacggatccagtggccctg
ataaccaggctacttcaacaggaaggagaggagtcgggaataaagatggagattgacggt
gacagtgcggagaagctgaagcctgtgtcagcgtcggggttgtttatcgattggtctgag
ctcttggaccccgaggttatttcctgctgtcctgaccaacaacagaggctcctgtttgcc
gatcacaaggttacaagtcagccaggattgcagcagctttcattccgaccctaccttctg
gctgtcctcatccaccagtcaaactggaccacagtacaccggtgcatcagcattctgctg
agtaagcatggagagctcagacttgaccccacagcgtgtttggattttctctgggcctgt
gtgcacattccgagaatttggcaaggacgtgaccaaagaactccacagaaacacaccgag
gagtatgtcctgcggttgaaaaaggcagaactcatcagcctggtggatatcattctttcg
gagtctgaagtgagaaaccgcaatgggtcgcatgctaagaaatctgctgaggatgtcaca
gggaccctcatccagtcacggctccctttgctgcttagctgttgccatggcaatttggat
aatgtcaaaaaagtgactgaatatttgatcagttgcatcaaacaatggggagacagcagt
gtgatgggcaagcgttgtcagaatctgctgcttcaaatatacttccatgttccagaggtt
atccgccacgtcaacctcccagactctgtgctgagcagtgatggcaccgctgatggaagt
acctgcaagctggacgcactggtccatcggttgcttacgctgctcgcagacaccagcgac
tcaaagatgtcattgaatcgaatggctgacgccaacatggcctgcagaaagttgtcagtg
gcacatccagttttattgctgagacatttgcccatgattgctgccctgctgcatggaaga
gttcacttgaatttccaggagttccgtcagcagaaccatttaacattcttccagcatatt
ctggggattatggagctgttacagccgtatttattccagagtgaacaccagggggcaatg
caggattgccttctctccttcatactgctcctgcagaattacgggaagttctccagactg
attgcttctttcatcaacaaatgtgtgcattttattcacaagtttataacttacaatgca
gcagcagctgtcccattccttcagaaacattcggatgtgctccattacctatcacgggaa
tatccagagatggctctgctgaagtccctgctggctggattaacactgccgactcggggc
ggacctgttgaggagaatgcagaggatgaggatggggaggacgaagcaccaggctccctt
ccgctggtcagtttttctgccataacaccgctgacctcagccgaagtggcaccttacctc
caaaagattgcgagagggcgcgctcttgaagatattctggaagtcctgactgatattgat
gagatgtcaaaacgtcgagtggaggtcctctccttctttactaatgatctgcagcggctg
atgagctccccggaggaactgtctcgaaatgcagcatttgtcttggccatgaggagtatc
cagagcaatccacgcactgccaccgactttctttcaactttcatgtactgtcttggctgt
ggaaattacgatgtggtgcagacagccctaaagaaccttccggaatatacactgctctgc
caagagcatgcaggggtccttcttcataaagcctttctggtcgggatgtacagccagctc
gacacaagcccacaaattgcagaggccatgaaggttctacacatggaagccacgacttaa
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integrated database retrieval system
