Parasphaerochaeta coccoides: Spico_0910
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Entry
Spico_0910 CDS
T01469
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-d iaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
scc
Parasphaerochaeta coccoides
Pathway
scc00300
Lysine biosynthesis
scc00550
Peptidoglycan biosynthesis
scc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Spico_0910
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Spico_0910
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
scc01011
]
Spico_0910
Enzymes [BR:
scc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
Spico_0910
Peptidoglycan biosynthesis and degradation proteins [BR:
scc01011
]
Precursor biosynthesis
Amino acid ligase
Spico_0910
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
MeaB
Motif
Other DBs
NCBI-ProteinID:
AEC02134
UniProt:
F4GIK0
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All DBs
Position
1054651..1056258
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AA seq
535 aa
AA seq
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MNAPVRLSELLEFSSLAHTLVFLKDGRPFPLPDIEITSIRHDSRVCDQGSIYCAFRGLHE
DGIDFMDNALEKGAAAVVTDRLPSRPHEGVPYIVVEAPRQAYALLCGSFFGNPASALKVI
GVTGTDGKSTTIEYLWQLLRGQGVRAGLLSTVSWDDGSGLVSSPYRQSTPEAWELHSFLS
SCRDHGLSIVILETTSHALSMEYDRLAGIAFSGAIYTTMTSEHLEFHGSLERYVDAKLNL
ARRLLPGSPLVIPHDNARKDDIMKAAPQAKPFITAVHHGKSSGCSRKEDGILNGTCISAT
VLGMEPEQLAFTFAINDKELTTLWRFPSPFPFLLSNALEAAAMAHSLIDIPLEAIIAQFE
KLSPVRGRAIPVPNSLGVTVLIDFAHTADAFAHVMEEISRVHPKADITVVFGAAGERDTT
KRAPMGAQAARWCSRIIITDEDPRNEGYEAIRKDIEAGIPDALKRRRTILRIADRKRAIR
EAVANLNRGDVLLLLGKGHETTIEYENGRKIPWDEMREAREALAVCAACREGSSL
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgccggtcaggttatcagaactccttgagttttcctcccttgcccataccctg
gtcttcctgaaggatggccggccgtttcctttgcccgacattgaaatcacatcaatacga
catgacagccgggtctgcgaccaaggaagcatatattgcgctttccgcggtctgcatgaa
gatggaattgacttcatggacaatgccctggagaaaggggctgcggctgttgtgacggac
agacttccctctcgtccacatgagggagtcccttatatagtggttgaggctccacggcaa
gcgtatgcgttgctttgcggctcattcttcggcaatcctgcctctgccttgaaagtcata
ggagtcacgggtactgacggaaaaagtacgacaatcgaatatctgtggcagttactccgt
ggacaaggagtacgtgcgggacttctcagtaccgtttcatgggatgatggcagcggattg
gtttcttcgccataccgacagagtaccccggaagcatgggaactccattctttcctttct
tcctgccgtgaccacggactttccattgtcatcctggaaaccaccagccatgcgttgagc
atggaatatgaccggctggcgggcattgctttcagcggagccatctacacgacaatgaca
agcgaacacttggaatttcatggttccctcgaacgctatgtagacgcgaagctgaacctt
gcccgacgcctgttgccgggctctcctctggtcatcccccatgacaatgcgcgcaaagac
gacattatgaaggcagctcctcaagccaagccattcatcactgccgttcaccacgggaaa
tcatcaggatgttcccggaaagaagacggcatcctcaacggaacctgtatttccgccact
gtcctcggcatggagccggagcaactcgctttcacctttgccatcaacgacaaagaattg
acgacactgtggagatttccctctccatttccttttctgctatccaatgctttggaagcg
gcggcgatggctcattccttgattgatattccactggaagccatcattgcgcagttcgag
aaactttcccctgtccgtggcagggcaattcccgtccctaattccctgggcgtgaccgtg
ctgatagactttgcccatactgctgacgcctttgcccatgtgatggaggaaatctctcgt
gtgcatcctaaagcggacatcacggtggtattcggagccgccggggagcgggacaccacg
aaaagagctcccatgggcgcacaggccgccaggtggtgcagcagaatcatcatcactgat
gaggacccccggaatgaaggatatgaggcaatccgcaaggacatcgaggctggcataccg
gatgcgttgaaaagacgcaggacgatactgcgcatagcggacaggaaacgggccatacgg
gaagcagtggcaaatctgaacagaggtgatgtgcttcttctgctgggcaagggacatgag
accacgatagaatatgagaacgggaggaaaatcccttgggatgaaatgcgcgaggcacgg
gaagctctggcagtctgtgccgcatgcagggaaggcagctcactatga
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