Parasphaerochaeta coccoides: Spico_1338
Help
Entry
Spico_1338 CDS
T01469
Name
(GenBank) lysine 2,3-aminomutase YodO family protein
KO
K01843
lysine 2,3-aminomutase [EC:
5.4.3.2
]
Organism
scc
Parasphaerochaeta coccoides
Pathway
scc00310
Lysine degradation
scc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
Spico_1338
Enzymes [BR:
scc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.3 Transferring amino groups
5.4.3.2 lysine 2,3-aminomutase
Spico_1338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
LAM_C
Fer4_12
zf-C2H2_3
Motif
Other DBs
NCBI-ProteinID:
AEC02544
UniProt:
F4GHF5
LinkDB
All DBs
Position
complement(1563983..1565059)
Genome browser
AA seq
358 aa
AA seq
DB search
MDEKGQSHGRGSMAVKAFARKQGIVLTEKEQAWEKDGTSPPFGVSTYYASLITPSDSDDP
IRRQILPTSCEMMYSPGESEDPLAEEEHSVTSRLIHRYAERVAFLVTDACAVYCRHCFRR
RFTGTQRGPATTEDIIAAARYVGAHQEVKEILFTGGDMFTLSNEKIDALIGEFRAVRPDL
IIRLCSRVPVVLPSRITDGLMAVMKKHSSAPFFLMVQFNHPRELTAQSREATARFIDAGI
PVFNQSVLLRGVNDDAGILEELCNGLLAARIKPYYLFQGDLVEGTAHLRVPLEKGLALVK
ELRRRLSGLAMPVYAVDLPEGGGKVPVDSMYLKGRDSDGAWVFETPDGGERRYRDPEV
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaaaggacagtcccacggcaggggcagcatggcggtgaaggcttttgcccgg
aaacagggcattgtgctgacagaaaaagaacaggcgtgggagaaggacgggacatcaccc
ccgttcggtgtcagtacgtattatgcttcccttatcacgccgtccgattccgatgatcct
attcgccgccaaatcctgccgacatcctgcgagatgatgtacagtccgggtgaaagcgaa
gatccccttgcggaggaagaacattcggtgaccagtcgcctgattcatcgttacgcggaa
agggtggctttccttgtcaccgatgcgtgcgctgtatactgccgccattgcttccggcgg
cgattcaccggcacgcagcgcggccctgccaccacagaagatatcatagcggcggcgagg
tatgtgggagcgcaccaggaagtgaaggaaatcctctttaccggaggggatatgttcact
ctgtccaatgagaagattgacgcactgatcggagagttccgcgccgtccggcctgacctc
ataatccgcctttgctcccgtgtgccggtggtcttgccatcacggattacggatggtctg
atggctgtcatgaagaaacactccagtgccccgttttttctcatggttcagttcaaccat
ccccgtgaattgacagcccagtcccgtgaggcgaccgcccgtttcattgatgcgggaatc
ccggtgttcaaccagagcgtcctgcttcgtggagtgaacgatgacgcgggaatcctggaa
gaactatgcaatgggttgctggccgccagaatcaagccatattatctctttcagggagat
ttggtggagggtactgcccatctgcgagtaccgctggaaaaaggattggctttggtgaag
gagctgcgtcgtcggctttccggtttggctatgccggtttatgcggtcgatttgcctgag
ggtgggggcaaagtgcctgtggacagcatgtacttgaaaggcagggattcggacggggca
tgggtttttgagacaccggacggcggagaacggcgttatcgggatccggaagtataa
DBGET
integrated database retrieval system
