Parasphaerochaeta coccoides: Spico_1380
Help
Entry
Spico_1380 CDS
T01469
Name
(GenBank) Cystathionine gamma-lyase
KO
K01739
cystathionine gamma-synthase [EC:
2.5.1.48
]
Organism
scc
Parasphaerochaeta coccoides
Pathway
scc00270
Cysteine and methionine metabolism
scc00450
Selenocompound metabolism
scc00920
Sulfur metabolism
scc01100
Metabolic pathways
scc01110
Biosynthesis of secondary metabolites
scc01120
Microbial metabolism in diverse environments
scc01230
Biosynthesis of amino acids
Module
scc_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
Spico_1380
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Spico_1380
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Spico_1380
Enzymes [BR:
scc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.48 cystathionine gamma-synthase
Spico_1380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
AEC02584
UniProt:
F4GHJ5
LinkDB
All DBs
Position
1616981..1618150
Genome browser
AA seq
389 aa
AA seq
DB search
MSEDYNCSQETIIVHGVTPYDSRTGAISTPIYLSSTFRHPELFQSTGFDYSRSLNPTRLE
LENTIARLEKGRYGLAFASGMSAISALIKLFAPGDHIIVSIDLYGGTYRLFHDIYEPYGL
HFSWVDTDDLEATKNALRPGTKAVFIETPSNPMMKVTDIRATADIIHSHGQKHGQEGYLI
VDNTFLSPYYQNPLELGADFVVHSGTKYISGHNDTLSGFIVHDDETIAEKLRFLQMSEGG
TLSPFESWLILRGLKTLAVRMDRQSENALVVAMWLQTHPKVESVYYVGLPDHPHHELSLR
QSKGFGGMVSFSLKDSADVASLLKNIRLILFAESLGGVETLLTYPMVQTHQAIPPDMRER
TGVTDRLMRLSVGLERAQDIIADLKQALD
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggattacaactgttcccaggaaaccatcattgtccacggtgtcactccctac
gattcccgtaccggagcgataagcactcccatttacctgagttcaaccttccgccatcct
gaactttttcaatcgacaggctttgactattcccgctccctgaaccccacgagactagag
ctggaaaacaccattgcccgtcttgagaaaggacgttacggacttgcgttcgcttccggc
atgagcgcaatatccgcgctcatcaagctgttcgcgccgggcgaccatatcattgtctcg
atagatctgtacggtggtacatatcgccttttccatgatatctacgaaccatacggactg
cacttctcctgggtggacaccgacgaccttgaagcaacaaagaatgccctgcgacccgga
acgaaagctgtcttcattgagactccctcaaaccccatgatgaaagtcactgacatccgc
gcgacggcggatatcatccattcccacggacagaagcacgggcaggaaggatacctcatt
gtggacaatacttttctttccccttattatcaaaatcccctggaactgggggcggacttt
gttgtccatagcgggacaaagtacatttccggacacaatgacacgctttcaggtttcatt
gttcatgatgacgagacaatcgcggaaaaactccgttttctccagatgagcgagggtggc
acgctcagcccctttgagtcatggctgattctccggggactcaaaactttggccgtccgc
atggacagacagagcgagaacgccttggtcgtagccatgtggttgcaaactcatcccaaa
gtcgaatcagtctactatgtcggcctgcccgaccatccccatcatgagctttccctccgc
caaagcaaaggcttcgggggaatggtttccttctccctcaaagactccgccgatgtggca
tctcttttgaagaacatacggctgatcctgttcgccgaaagtctgggaggcgtggaaacc
ctcctcacctatcccatggttcagactcaccaagccattccccccgacatgagggagcgg
acaggggtcaccgaccgcctgatgcggttgtccgtcggactggaacgagcgcaggacata
atagccgaccttaaacaggctctggactga
DBGET
integrated database retrieval system