Gracilinema caldarium: Spica_0584
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Entry
Spica_0584 CDS
T01573
Name
(GenBank) RNA 2'-O-ribose methyltransferase
KO
K06968
23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:
2.1.1.186
]
Organism
scd
Gracilinema caldarium
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scd03009
]
Spica_0584
Enzymes [BR:
scd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.186 23S rRNA (cytidine2498-2'-O)-methyltransferase
Spica_0584
Ribosome biogenesis [BR:
scd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Spica_0584
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FtsJ
SAM_MT
Methyltransf_23
Methyltr_RsmB-F
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
AEJ18744
UniProt:
F8F1A0
LinkDB
All DBs
Position
complement(640506..641447)
Genome browser
AA seq
313 aa
AA seq
DB search
MSAQSEVMEGIIYQGIDEFQDHLQKELGQYEYLGGKLYFAGGPRKDAFWTENIWLTPIKI
TFNSISEGAKSLRDIQRNWAPVLFTQYRRGMLIQEKLPPINQKERPFPWLIPDSFMGSWT
LLDANTMLASPFCTSPFPGGKISFIENKVDPPSRAYLKLQEALVRARKWPQAGERCLDAG
ACPGGWTWVLTQLGARVTAIDRSPLDDRLMQHPLVTYIKHDAFTLKPEEIGPVDWLFSDV
ICYPPRLYEWIQKWLASGLAKNYICTIKMQGEGDFETPKAFAAIPGSQVVHLNYNKHELT
WIKLADSTRDPDN
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcccaatcagaggttatggaaggaatcatttatcaggggattgatgaatttcaa
gaccatctgcaaaaagaacttggccagtatgaatacctggggggtaagctgtactttgcg
gggggacccagaaaagatgccttctggacagagaatatttggcttacacccatcaaaatt
acctttaactcaatctccgaaggggcaaaaagcctgcgggatatacagcgtaactgggca
ccagtactctttacccagtatcggcggggcatgctcatccaggaaaagctcccacctata
aaccagaaggaacgcccctttccctggcttatccccgattcattcatgggctcctggacc
ctcctcgacgccaacaccatgcttgccagccctttctgtaccagcccttttcccgggggc
aagatatcttttatagaaaacaaggtggatccaccaagccgagcatacctaaaactgcag
gaagctctggtccgtgcccggaagtggccacaggcaggagaacgctgtcttgatgcagga
gcctgtccaggcggctggacatgggttctcacccaactgggggcccgggttaccgccata
gaccgttctcccctggatgatcgtctcatgcaacatcccctcgttacctatatcaaacac
gatgcctttaccctgaaacctgaagagattggccctgttgattggctcttcagcgatgtt
atctgctatccaccgcggctttatgaatggattcaaaagtggttagcttctggcttggca
aaaaactatatctgtactataaaaatgcagggggaaggagattttgaaacccccaaggcc
tttgcagccatccctggaagccaggtcgtgcacctgaattacaacaaacacgaacttacc
tggataaaactggccgacagtaccagagaccctgacaattga
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