Gracilinema caldarium: Spica_0731
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Entry
Spica_0731 CDS
T01573
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
scd
Gracilinema caldarium
Pathway
scd01501
beta-Lactam resistance
scd01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Spica_0731
01503 Cationic antimicrobial peptide (CAMP) resistance
Spica_0731
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scd03036
]
Spica_0731
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scd02000
]
Spica_0731
01504 Antimicrobial resistance genes [BR:
scd01504
]
Spica_0731
Chromosome and associated proteins [BR:
scd03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Spica_0731
Transporters [BR:
scd02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Spica_0731
Antimicrobial resistance genes [BR:
scd01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Spica_0731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
AEJ18885
UniProt:
F8EYT9
LinkDB
All DBs
Position
complement(801034..801951)
Genome browser
AA seq
305 aa
AA seq
DB search
MNRRNFVIFGIFIILIGAILLLPRNQSASQSKTKPAFAQQAVNVKTELVNRKNLQDYIIT
NGEVTSETIVSVYPFTSGKIDSLLVYIGSEVSKGDIIAYIDPSKPGTAYALNPVLSPISG
TVLELPLQIGATVSTNSSIATIGVLDKLEIVTSIPERYSALMKTGLTASISFEALPDHPF
SADVIRVSPILDSTSRTRKVYLKIKGNPDPRLVIGMYARIRLNTVFYPNRIVISEKAINT
LNGTDYVFVVKNDNTVNRRGIVKGVTIDGMVEIISGLEENERVVIEGAQNLTDGILVHDV
ESGEN
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtcgaaattttgtaatttttggaatttttataatactgattggagcaatcctt
ctcttgccccgaaatcaatccgcttctcaatcaaaaacaaaaccagcatttgctcagcaa
gctgtaaacgtaaaaactgaacttgtaaatcgcaaaaaccttcaggattatattataaca
aatggtgaagtaacaagcgaaactattgtttccgtatatccatttacgagtggaaagatt
gattctttactggtttatattggatcagaagtttctaaaggtgatataatcgcttatatt
gatccttctaaaccaggtacggcatatgcattaaatccagtactaagccctatttccggc
acggtgcttgaactcccactacaaataggtgcaacagttagcacaaatagcagtattgct
acgataggcgttcttgataaattagaaattgttacttcaattccagaacggtattctgcg
cttatgaaaacagggcttaccgcatctatctcatttgaagctttaccagatcacccattt
tcagcagatgtgattagggtatctcctattcttgattctacttctcgtacaaggaaagtg
tacctgaaaattaaaggaaatcctgatcctcgtcttgtgattggaatgtatgctcgaatt
cgccttaacacggtgttttatcccaatcgaatcgtgataagtgaaaaggcaataaataca
ttaaatggcaccgattatgttttcgttgttaaaaatgataatacggtaaatcgccgtggg
attgtaaaaggtgtcacaatagatggaatggttgagattatatcaggtcttgaagaaaac
gaacgggttgttattgaaggtgcacaaaaccttaccgatggcatactcgtacatgatgta
gaatcgggagaaaattaa
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