Gracilinema caldarium: Spica_1876
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Entry
Spica_1876 CDS
T01573
Name
(GenBank) biotin and thiamin synthesis associated
KO
K03150
2-iminoacetate synthase [EC:
4.1.99.19
]
Organism
scd
Gracilinema caldarium
Pathway
scd00730
Thiamine metabolism
scd01100
Metabolic pathways
scd01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Spica_1876
Enzymes [BR:
scd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.19 2-iminoacetate synthase
Spica_1876
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Gene cluster
GFIT
Motif
Pfam:
BATS
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
AEJ20010
UniProt:
F8F3Z1
LinkDB
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Position
complement(2068941..2070425)
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AA seq
494 aa
AA seq
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MKTLNHLDEPVAAAASHTGADRASSVHPSTFLDYNKLSELSRLPAPTPDRVDAILAKART
LQGLTAEEAAELAAISDPDQMQALLATAGWVKEQIYGKRMVLFAPLYTGNYCVNNCVYCG
FRVDNRDMKRVVLSMDEIAHQTEILLSQGHKRLLIICGESPKQSLDYTLKAIETVYAVRV
GTARVRRINVELAPLDVEGFRALKQAQIGTYVCFQETYDPELYRRAHPSGPKADYLYRLY
VMDRAMEGGCDDIGLGALFGLGSWRYELVALLEHARHLEETFGWGPHTVSVPRIEYAPGA
PWAEVVPNPVSDDDFRKIVAILRIARPSVGIILSTRERTEFRKELLAYGVSQISAGSRTD
PGGYEDEQNAQKGSAEEHQHPAQFAIGDLRGLEETISDLIDDGYVPSFCTGCYRKGRTGA
DFMDLAKPGLIKEFCLPNGLVSFAEYLYDYASPATREKGLALIERMKEEATTKGKVYLEK
ALKETEAGARDLYL
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacactgaaccatcttgatgaaccggtggcggctgcggcaagccacacaggagca
gacagagccagctctgttcatccatcaacctttctggactataacaagctttctgaactg
tcccggcttcccgcgccgaccccagatcgggtcgatgcaattcttgcaaaggcccggact
ttgcagggtcttactgcggaagaagcggcggaactggcggccatcagcgaccctgaccag
atgcaagccctgctggcaaccgcaggctgggtaaaggagcagatttacggcaagcggatg
gtcctttttgcgcccctgtatacaggaaattactgcgttaataattgtgtctattgcggc
ttccgtgtggataaccgggatatgaaacgggttgtcctttccatggatgagattgcccat
cagacagagatacttctttcccagggtcataaacggctcctcattatctgcggcgaatct
ccaaaacagtcgctggactatacccttaaggctatcgaaacggtttatgcggtacgggta
ggtaccgcccgggttcggcgcatcaatgtggagctagctcctttggatgtagaaggcttt
cgggcgctcaagcaggctcaaatcggcacctatgtctgttttcaggaaacctatgacccg
gagctataccggcgggcccatccgtcagggcccaaggcagactacctctaccggctctat
gtgatggaccgggctatggaagggggctgtgatgacatcggcctcggcgccctctttggg
ctaggttcctggcgctatgaactggtggccctcttggaacatgcccggcacctggaagaa
accttcggctggggaccccacacggtgagcgtcccccgcatcgaatatgctccgggggca
ccctgggctgaggtggtgccgaacccggtctccgatgatgacttccgtaaaatcgtggcc
atcctccgtatcgcccggccatcggtggggatcatcctttctacccgggaacggaccgaa
ttccgcaaggaacttctggcctacggggtgagccaaatctccgccggttcccggaccgat
ccggggggctatgaggatgaacagaatgcacagaagggctccgccgaagagcatcagcac
cccgcccagttcgctatcggagacctgcggggcctggaagaaaccatatcggaccttatc
gatgacggctatgtacccagtttctgcaccggctgttaccgaaaggggcggaccggggca
gattttatggatctggcaaagccggggcttatcaaggagttctgcctccccaatgggctc
gtgtcctttgcggaatacctctacgactatgcaagccccgcaacccgggaaaagggcctg
gccctcattgagcggatgaaagaggaggccaccaccaagggtaaggtgtacctggaaaag
gcccttaaggaaaccgaagcgggagcccgggacctgtatctatga
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