KEGG   Gracilinema caldarium: Spica_2109
Entry
Spica_2109        CDS       T01573                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
scd  Gracilinema caldarium
Pathway
scd03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:scd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Spica_2109
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:scd03400]
    Spica_2109
Enzymes [BR:scd01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Spica_2109
DNA repair and recombination proteins [BR:scd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Spica_2109
 Prokaryotic type
     Spica_2109
SSDB
Motif
Pfam: HhH-GPD HHH HHH_5 EndIII_4Fe-2S RecR_HhH
Other DBs
NCBI-ProteinID: AEJ20234
UniProt: F8F0U8
LinkDB
Position
2373403..2374092
AA seq 229 aa
MPNSSVPWDTIFAILETWQQDLEKQGIDLPSVSNLAFEAETDTYRPWVVLVSTVISLRTK
DAVTLSSSRRLLAKAPTPEALVKLTKDEIAQSIYPAGFYRTKAEHLHTIADLLIHQYDGK
VPDTLEVLLSLPGVGRKTANLVLSEGFGQDAICVDTHVHRICNRTGWVVTKVPEETEQAL
RHILPRPYWRRINWLLVQFGQQICRPQSPLCSQCPLTSFCKRQGVSKSR
NT seq 690 nt   +upstreamnt  +downstreamnt
atgcccaattctagtgttccctgggataccatatttgcaatcctcgagacatggcagcaa
gatctcgaaaaacaaggtatagacctcccttcggtgagcaatctcgcgtttgaagccgaa
accgatacctaccgaccctgggttgttttagtatctaccgttatcagcctacgaacaaaa
gatgcggttaccctttccagttcccggcgcctccttgcaaaagcacctacaccggaagca
ctggtaaagcttacgaaggacgaaatcgctcaatctatctatcctgcgggcttttatcgg
accaaagctgaacacctgcataccattgcagatctcctcatccaccagtatgatggaaag
gtacctgatactctggaagtgcttctcagccttcctggggtcggtagaaaaactgcaaac
ctggtcctatcggaaggcttcggccaggatgccatctgtgtggatacccatgtgcatcgg
atctgcaaccggactggctgggttgttacgaaggtaccggaggaaactgaacaggcgctt
cgccatatcctgccccgcccctattggcgacgaataaactggctccttgtacagtttggt
cagcagatctgccgcccccagagccctctttgttcccagtgccccctgacttccttttgc
aaacgtcagggggtttcgaaatctagatga

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