Gracilinema caldarium: Spica_2733
Help
Entry
Spica_2733 CDS
T01573
Name
(GenBank) peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
scd
Gracilinema caldarium
Pathway
scd00550
Peptidoglycan biosynthesis
scd01100
Metabolic pathways
scd01502
Vancomycin resistance
scd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Spica_2733
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Spica_2733
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Spica_2733
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
scd01002
]
Spica_2733
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
scd01011
]
Spica_2733
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
scd01504
]
Spica_2733
Enzymes [BR:
scd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
Spica_2733
Peptidases and inhibitors [BR:
scd01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
Spica_2733
Peptidoglycan biosynthesis and degradation proteins [BR:
scd01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
Spica_2733
Antimicrobial resistance genes [BR:
scd01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
Spica_2733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VanY
Peptidase_M15
Motif
Other DBs
NCBI-ProteinID:
AEJ20829
UniProt:
F8F139
LinkDB
All DBs
Position
complement(3092075..3092854)
Genome browser
AA seq
259 aa
AA seq
DB search
MKIFRYIILSFFVLMGCIPVSAQKRSAEAELKLQKALEAAKVPLTIQEKLLYEMRANPEN
FIKAITTITSQDHYLWRLVDKHHALDTEYEPSDLVTLTSGSYLLNRSGLQLRKSASLALN
SMAQAAKVDGVTLVVSSCYRSYQYQKQVYERNVKTMGQAAADRESAKPGHSQHQLGLAVD
FGSIDDSFAKTAQSRWLEQNAWRYGWSLSYPENMESVTGYRWESWHYRFVGVELSLFIRT
YFENIQQYALAFLHYYTAE
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatatttcgttatattatcttgtctttttttgtattgatgggctgtattcctgtt
tctgctcaaaagagaagtgcggaagcagaactaaagcttcagaaagcccttgaggctgcc
aaagtgcctctaactattcaagaaaaactcttgtatgaaatgagagccaatcctgaaaac
ttcattaaagcaattacaacaattacatcccaagaccactatctatggcgtttggtcgat
aaacatcatgctttggacactgaatacgaacccagcgatttagttacgttaaccagtggt
tcatatctattaaaccgttcgggcttacaactaagaaagtcggcctctcttgcgcttaat
agtatggcccaagctgcaaaggttgatggggtgacattggttgtctcttcctgttatcgt
agttatcagtaccagaaacaggtttatgaacgaaatgttaaaacgatgggacaggcagcg
gctgatagggaatctgcgaaaccgggacacagccagcatcagctagggctagctgtcgat
tttgggagtatcgatgactcctttgcaaagacagcccagagccgctggctggaacaaaat
gcctggcggtatggatggtccctttcatatccagaaaatatggaatctgtaactggctat
cgatgggaaagctggcattatcggtttgtaggcgtggaactcagcttgtttattcgaacc
tattttgaaaatatccagcagtatgccttagcttttctgcattactatactgctgaatag
DBGET
integrated database retrieval system
