Saccharomyces cerevisiae (budding yeast): YER051W
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Entry
YER051W CDS
T00005
Symbol
JHD1, KDM2
Name
(RefSeq) [Histone H3]-lysine-36 demethylase
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
YER051W (JHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sce03000
]
YER051W (JHD1)
04121 Ubiquitin system [BR:
sce04121
]
YER051W (JHD1)
03036 Chromosome and associated proteins [BR:
sce03036
]
YER051W (JHD1)
Enzymes [BR:
sce01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
YER051W (JHD1)
Transcription factors [BR:
sce03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
YER051W (JHD1)
Ubiquitin system [BR:
sce04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
YER051W (JHD1)
Chromosome and associated proteins [BR:
sce03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
YER051W (JHD1)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
YER051W (JHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cupin_8
PHD
C1_1
JHD
JmjC_2
JmjC
Cupin_1
PHD_Oberon
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
856777
NCBI-ProteinID:
NP_010971
SGD:
S000000853
UniProt:
P40034
LinkDB
All DBs
Position
V:254656..256134
Genome browser
AA seq
492 aa
AA seq
DB search
MQDPNICQHCQLKDNPGALIWVKCDSCPQWVHVKCVPLKRIHYSNLTSSEVLSYPNSAKQ
IKSYRCPNHKEGEYLTAYALITQKGKRQRNKENPEDSHINKRYNFRKKKLLDYIALNEGE
SKRDKMNHPHKESFMKSFEKWKNGSNIINAADFAEKFDNIDVPYKIIDPLNSGVYVPNVG
TDNGCLTVNYITEMIGEDYHVDVMDVQSQMNENWNLGSWNEYFTNTEPDRRDRIRNVISL
EVSNIEGLELERPTAVRQNDLVDKIWSFNGHLEKVNGEKAEENDPKPKVTKYILMSVKDA
YTDFHLDFAGTSVYYNVISGQKKFLLFPPTQSNIDKYIEWSLKEDQNSVFLGDILEDGIA
MELDAGDLFMIPAGYIHAVYTPVDSLVFGGNFLTIRDLETHLKIVEIEKLTKVPRRFTFP
KFDQVMGKLCEYLALDKNKITSDVSDGDLLSRTTNCAIQSLHAYVIKPEVKYKPLNFTSK
KHLAKALADLIS
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatcccaatatttgccagcattgccagttgaaggataatccaggcgcattaatt
tgggtgaagtgtgatagttgcccgcagtgggtccacgtgaaatgcgtgcctttgaaacgc
attcactattcaaatcttacaagttctgaagttctgtcttatccaaattctgcgaagcaa
atcaagagctaccgttgtcctaatcataaggaaggagaatatcttaccgcatacgctctc
atcacacaaaaaggaaagcggcaaaggaataaagaaaaccctgaagatagtcatataaat
aagcggtataatttcagaaagaagaaattacttgactatatcgctttgaatgagggtgaa
tcgaaaagggataaaatgaatcaccctcataaggagagtttcatgaaatcttttgaaaaa
tggaaaaatggctcaaatattataaacgccgctgactttgctgaaaagtttgataatata
gatgtgccgtacaagatcatcgatccactgaatagcggagtatatgtaccgaatgtgggc
acagacaatggatgcctcacagttaattatatcaccgaaatgataggcgaggattatcat
gttgatgtaatggacgttcaatcacaaatgaatgaaaattggaacttgggatcttggaat
gaatattttacaaatactgaaccagacaggagggatcgaataaggaatgttatatcatta
gaagtctctaatattgagggattagaactagagaggcccactgcagttaggcagaatgat
cttgttgataaaatttggagtttcaatggacatttagaaaaagtcaatggggagaaggcg
gaggagaatgaccccaagccaaaagtgaccaaatatattttgatgtctgtaaaggatgct
tatacggattttcatttggattttgccggtacctctgtttattataacgttatctcagga
cagaagaagtttttattatttccacctacccaatcaaacatagataagtatattgagtgg
tctttaaaagaagaccaaaatagtgttttcctcggtgatattcttgaggatggtattgcg
atggaattagatgctggtgatttgtttatgattccagctggatatattcatgcagtttat
acaccagtagactctttggtatttggaggcaactttttaaccatccgtgatttggagaca
caccttaaaattgtggaaattgaaaagttaacaaaggttcctagaagatttaccttcccg
aagtttgatcaagtgatgggtaaattatgcgagtatcttgcgcttgataaaaataaaatc
actagtgatgtcagtgatggggatttgctttccaggaccactaattgcgcaattcaatca
cttcatgcatacgttataaaacctgaagttaagtacaagccgttaaatttcacttcaaag
aagcatttagcgaaagctttagccgatcttatttcgtaa
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integrated database retrieval system
