Saccharomyces cerevisiae (budding yeast): YLR438C-A
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Entry
YLR438C-A CDS
T00005
Symbol
LSM3, SMX4, USS2
Name
(RefSeq) U4/U6-U5 snRNP complex subunit LSM3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03018
RNA degradation
sce03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
YLR438C-A (LSM3)
09123 Folding, sorting and degradation
03018 RNA degradation
YLR438C-A (LSM3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sce03019
]
YLR438C-A (LSM3)
03041 Spliceosome [BR:
sce03041
]
YLR438C-A (LSM3)
Messenger RNA biogenesis [BR:
sce03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
YLR438C-A (LSM3)
mRNA degradation factors
5'-3' decay
Lsm complex
YLR438C-A (LSM3)
Spliceosome [BR:
sce03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
YLR438C-A (LSM3)
Complex C
U2 snRNP components
YLR438C-A (LSM3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
851159
NCBI-ProteinID:
NP_013543
SGD:
S000006434
UniProt:
P57743
Structure
PDB
PDBj
LinkDB
All DBs
Position
XII:complement(1013909..1014178)
Genome browser
AA seq
89 aa
AA seq
DB search
METPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESE
RRCEMVFIRGDTVTLISTPSEDDDGAVEI
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atggagacacctttggatttattgaaactcaatctcgatgagagggtgtacatcaagctg
cgcggggccaggacgctggtgggcacactgcaagcgttcgactcacactgcaacatcgtg
ctgagtgatgcagtagagaccatataccaattaaacaacgaggagttgagtgagtccgaa
agacgatgtgaaatggtgttcatcagaggagacacagtgactctaatcagcacgccctct
gaagatgacgatggcgcagtggagatataa
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integrated database retrieval system
