Squalius cephalus (European chub): 307145282
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Entry
307145282 CDS
T11930
Symbol
plod3
Name
(RefSeq) multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3
KO
K13646
lysyl hydroxylase/galactosyltransferase/glucosyltransferase [EC:
1.14.11.4
2.4.1.50
2.4.1.66
]
Organism
scep Squalius cephalus (European chub)
Pathway
scep00310
Lysine degradation
scep00514
Other types of O-glycan biosynthesis
scep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
307145282 (plod3)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
307145282 (plod3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
scep01003
]
307145282 (plod3)
Enzymes [BR:
scep01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.4 procollagen-lysine 5-dioxygenase
307145282 (plod3)
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
307145282 (plod3)
2.4.1.66 procollagen glucosyltransferase
307145282 (plod3)
Glycosyltransferases [BR:
scep01003
]
O-Glycan biosynthesis
O-linked Gal type
307145282 (plod3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GT_PLOD
Glyco_tranf_2_4
2OG-FeII_Oxy
Anp1
OGFOD2-like
2OG-FeII_Oxy_3
DUF6492
HK_sensor_dom_bact
Motif
Other DBs
NCBI-GeneID:
307145282
NCBI-ProteinID:
XP_079704412
LinkDB
All DBs
Position
18:complement(36029378..36067597)
Genome browser
AA seq
732 aa
AA seq
DB search
MTAVRVILILFLGSVQLCRAEPRSGKPSEVLVITAATEATDGYLRFMRTIRQFNYSVQVL
GLGEQWRGGDVARTVGGGQKVRWLKKELEKHKDKHNTVVMFVDSYDVILASGPAELLKKF
SRLSHRVVFSAEGFCWPDQRLASKYPAVHHGKRFLNSGGFIGFAPEIYAIVQQWKYKDND
DDQLFYTRIYLDKEQRRKFNITLDHKSSIFQNLNGAIEEVVLKFEKARVRARNVVYDTLP
VVIHGNGPTKLQLNYLGNYVPTAWTYENGCGNCDDDLLDQSHLSDEEMPLVHIAVFIEQP
TPFLDEFLERLATLHYPHTRLRLFIHNNVVYHEQHIERFWTRHRSLFPAARIVGPEENLR
QDQARTMAVEACKKDVSCDYFFSIDSDVALTNPDILRILIEENKAVIAPMLSRHGKLWSN
FWGALSPEGFYSRSEDYIDIVQSKRVGLWNVPYITQVYLIRGETLRSRLAAVSLYQQEGM
DPDMIFCKSVREQGIFMFVSNRDEFGRLVSSTNYNISRLYPDLWQIFDNPVDWREKYIHE
NYSRIFEDDEDVVEQPCPDVYWFPAFSDRMCDELVETMEDFGGWSGGRHTDERLAGGYEN
VPTVDIHMNQIQYEKEWLKFLKDYIVPVTEKLYPGYYPKAQAVMNFVVRYRPDEQPSLRP
HHDSSTFTINIALNSKGTDYEGGGCRFLRYDCKVESPRKGWSFMHPGRLTHYHEGLPTTQ
GTRYIMVSFVDP
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgactgcggtgcgcgtgatcctgatcctgtttctgggctccgttcagctctgccgagcc
gagccgcgctccgggaaacccagtgaggtgttggtgatcacagcagccacagaagcgacc
gacggctacctgaggttcatgcggaccatccgacagttcaactactctgttcaggtcctg
ggtctgggtgagcagtggagggggggtgacgttgctcggaccgtcggtggaggccagaag
gttcgatggctgaagaaagaactagagaaacacaaagacaaacacaacactgtcgtcatg
tttgtggacagttatgatgtgattttagccagtggtccagcggagctgctgaagaagttt
tctcgtctctctcatcgcgtcgtgttctcggccgagggattctgctggccggaccagaga
ctcgcgtccaaatacccagcggtgcatcatgggaaacgcttcctcaactctggaggtttc
atcggcttcgctcctgagatttatgcaatagtgcaacagtggaaatacaaagacaacgat
gatgaccagctgttttacacacgcatctacctggacaaagagcagaggcggaagttcaac
atcacgctggaccacaaatccagcatttttcagaatctcaatggagccatagaggaagtg
gtgctgaagtttgagaaggccagagtcagggctcgaaacgtggtctatgacacacttcct
gtcgttatccatggcaacgggccaacgaagctccagctgaattacctgggtaactacgtg
ccgacggcgtggacgtatgaaaacggatgtggaaactgtgacgatgatttgctggaccag
agtcatctgtctgacgaggagatgccgctggttcacatcgctgtgtttatcgagcagccg
acgccgtttctggatgagtttctggagagactcgcaactctgcactacccacacacacgc
ttacgactcttcatacacaacaacgttgtgtatcatgaacagcacatcgagcggttctgg
acgcgtcatcgctctctgttccctgcggcgagaatagtcggacctgaggaaaaccttaga
caggaccaggccagaaccatggcagtggaggcgtgtaagaaggacgtgtcgtgtgattac
ttcttcagcatcgactctgatgttgctctgaccaatcccgatattttgcggattctcatc
gaagagaacaaggctgtgatcgcgcccatgctgtctcggcacgggaagctctggtcaaac
ttctggggcgctttgagtcccgagggcttttactcgcgctcagaggactacatcgacatc
gtgcagagcaagagagttggtctgtggaacgtcccctacatcactcaggtgtatctgatc
cgcggagagactctgcgctcgcgtctggctgcggtctctctctatcagcaggagggaatg
gacccggacatgatcttctgcaagagcgtccgtgagcagggcatcttcatgttcgtgtcc
aaccgggatgagttcgggcgtctggtctcctccactaattacaacatcagtcgtctttat
ccagacttgtggcagatattcgacaacccagtggactggagagagaaatatatccatgag
aattactccaggatttttgaagacgatgaggatgttgtggagcagccctgtccagacgtg
tactggttcccagcgttctctgacagaatgtgtgacgagctcgtggagaccatggaggat
ttcggcggatggtctggaggaagacacacggacgagcggttagctggaggttatgagaac
gttcctacagttgatattcacatgaatcagatccagtatgagaaagagtggctgaagttc
ctcaaagactacatcgttcctgtgacagaaaaactctacccagggtactatccgaaggct
caggctgtgatgaatttcgtggttcgttatcgtcctgatgagcagccgtcgctccgtccg
catcacgattcctccacattcaccattaacatcgcactcaacagcaaaggcaccgattat
gagggtggaggttgccggtttctgcgttacgactgtaaggtggagtctcccaggaagggc
tggtcgtttatgcacccgggccggttgacgcactaccacgaggggcttcccaccacacaa
gggactcgatacatcatggtctcattcgttgacccttga
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