Squalius cephalus (European chub): 307145291
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Entry
307145291 CDS
T11930
Symbol
vdra
Name
(RefSeq) vitamin D3 receptor A isoform 1
KO
K08539
vitamin D3 receptor
Organism
scep Squalius cephalus (European chub)
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
scep01009
]
307145291 (vdra)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scep03000
]
307145291 (vdra)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
scep03310
]
307145291 (vdra)
Protein phosphatases and associated proteins [BR:
scep01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
307145291 (vdra)
Transcription factors [BR:
scep03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
307145291 (vdra)
Nuclear receptors [BR:
scep03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
307145291 (vdra)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PCF11_charged
ArsA_ATPase
Motif
Other DBs
NCBI-GeneID:
307145291
NCBI-ProteinID:
XP_079704442
LinkDB
All DBs
Position
18:34913761..35015395
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AA seq
419 aa
AA seq
DB search
MDAMAVSTSAAGPDEFDRNAPRICGVCGDKASGFHFNAMTCEGCKGFFRRSMKRKASFTC
PFSGNCSITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKKDLILKRKEEEAAREAR
KPRLTEEQMQIINTLMEAHHKTYDDSYSDFVRFRPPVREGPVTRSASRAASLHSLSDASS
DSFNHSPESVDTKLNFSNLLMMYQDSSPDSSEEDSSRLSMLPHLADLVSYSIQKVIGFAK
MIPGFRDLTAEDQIALLKSSAIEIIMLRSNQSFSLEDMSWSCGGPDFKYCVNDVTKAGHT
VELLEPLVKFQVGLKKLNMHEEEHVLLMAICLLSPDRPGVQDHVRIEALQDRLCDVLQAY
IRIHHSGGRLVYAKMIQKLADLRSLNEEHSKQYRSLSFQPEHSMQLTPLVLEVFGSEVS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggatgccatggccgtgagcacgtcagcggcgggtcccgatgagttcgaccgcaacgcg
ccgcgcatctgtggagtgtgtggagacaaagcctccggtttccacttcaacgccatgacc
tgcgagggctgcaagggcttcttcaggcgcagtatgaagcgcaaggcgagctttacctgc
ccgttcagcggaaactgctccatcaccaaagacaaccggcgccactgccaggcctgtcgt
ctgaagcgctgcgtcgacatcggcatgatgaaggagttcattctgacggacgaggaggtg
cagagaaagaaggatttgatcctgaaaagaaaggaggaggaggcggcgcgcgaggcgagg
aaacctcgtctgactgaggaacagatgcagatcatcaacacattgatggaggcgcatcac
aagacctacgacgactcctactccgacttcgtccgattcaggcctccggtccgcgagggt
cccgtcactcgcagcgccagtcgagcagcgtctctacactctctgtctgacgcctcatca
gattcattcaaccattcaccagagtctgtggacacgaagctgaacttcagtaatctgctg
atgatgtatcaggacagtagtcccgactccagcgaggaggacagctctcgcctctccatg
ttaccgcaccttgcagacctcgtcagctacagcatccagaaggtcatcggattcgccaag
atgatcccgggattcagggacctgacggcagaagatcagatcgctctgctcaagtccagt
gccatcgagatcatcatgttgaggtcgaatcagtcgttcagtctcgaggacatgagctgg
agctgcggaggaccagacttcaaatactgcgtcaatgacgtcaccaaggcgggtcacaca
gtggagcttttggagccgctggtcaagtttcaagtgggtctgaagaagctgaacatgcat
gaagaggagcatgtgcttctgatggccatatgcctgctgtctccagaccgtccgggcgtt
caggaccacgtgcgcatcgaagcgcttcaggaccgcttgtgtgacgttctccaggcgtac
atccgcatccatcactcgggcgggcgcctggtctacgctaagatgatccagaagctggcg
gacctgcgcagcctgaacgaggagcactcgaagcagtaccgctcgctgtccttccagccg
gagcacagcatgcagctcacgcccctggtgctcgaggtgttcggcagcgaggtgtcctag
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