Squalius cephalus (European chub): 307145669
Help
Entry
307145669 CDS
T11930
Symbol
b4galnt1a
Name
(RefSeq) beta-1,4 N-acetylgalactosaminyltransferase 1a isoform 1
KO
K00725
(N-Acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase [EC:
2.4.1.92
]
Organism
scep Squalius cephalus (European chub)
Pathway
scep00600
Sphingolipid metabolism
scep00604
Glycosphingolipid biosynthesis - ganglio series
scep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
307145669 (b4galnt1a)
09107 Glycan biosynthesis and metabolism
00604 Glycosphingolipid biosynthesis - ganglio series
307145669 (b4galnt1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
scep01003
]
307145669 (b4galnt1a)
Enzymes [BR:
scep01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.92 (N-acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase
307145669 (b4galnt1a)
Glycosyltransferases [BR:
scep01003
]
Glycan extension
Glycolipid
307145669 (b4galnt1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glycos_transf_2
FKRP_N
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
307145669
NCBI-ProteinID:
XP_079705181
LinkDB
All DBs
Position
18:complement(23264486..23307393)
Genome browser
AA seq
532 aa
AA seq
DB search
MRFTTKKSMVGLLVVLPLTAMLIYHWNSYAITTINVLQGDDSLNVLLEERTRIMVRGNDH
IPYHIKDGMSKLLAVNGCVCEGDKPGINFPFAQLLFPKVSASQLQASLQDSDLQKAKQYR
NKEYRSFSKRTHTAADSLILSEANSPLQYPTQGVEVRPTRTILIPGLRLNQIHKVDHYLV
GLNATMGTFNTAALVDGVQVKGEGEMHISFMSKSLSSLNRQLEFVTYTNTLFHPNTADVV
QFKAGIFLATFTIKIRHPPMPKFYNPGPRKEYNVCTLVTIATKTFLRYDKLQDLINSIRQ
FYPTITIVIADDTRDPKPVTGPYIEHYIMPFGKGWFAGRNLAVSQVTTKYVLWVDDDFIF
TSSTKLEKMVDILERTTLDLVGGAVREVTGYTATYRHTISTDAGDKEGDCLHIRTGFHHA
IEGFSNCVVADAVINFFMARTEKMREVGFDPRLARVGHLAFFIDGLGSLHVGSCDDVIIS
HASKIKAMLPWGQSETDKAYSKFRYHSTEDSTSMNEYDLYYLKNHFKCVTSD
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttcacaaccaagaaatcaatggtgggtttgctggtggtcttgccgctcacagcc
atgctcatttaccactggaactcctacgccattacaacgattaatgtgctacagggagac
gactctttaaatgtgctactggaggaaaggacacgaatcatggtccgtggaaatgaccac
atcccttaccatatcaaagatggcatgtcaaagttacttgctgttaatgggtgtgtttgt
gaaggcgacaaaccgggcattaattttccattcgctcagctgctgttccctaaagtatca
gcttcacagctacaagcatctctccaagattcagacctgcaaaaagcaaagcaatacaga
aataaagagtatcgcagtttcagtaagaggacgcatacagctgcagactcgcttatctta
tctgaagccaacagtcctcttcagtaccctacgcagggtgtggaagtcagaccaacaagg
accattctaattcctggtttgaggctgaaccaaatacacaaagtggaccattatttggta
ggtctgaatgctacaatgggaacattcaatacggcagcgctggtggatggagtacaagtc
aaaggggaaggagagatgcatattagttttatgagcaaatctctgtcctcattaaacagg
cagcttgagtttgttacctacacaaacacactgttccatcccaacacagcagacgtggta
caatttaaagcaggtattttcctggccaccttcacaattaagatcagacatccaccaatg
cctaaattctataatcctggacccagaaaagaatacaatgtatgcactctggtcaccatt
gccacaaaaacatttctacgatatgataaacttcaggatttgatcaacagcattcgacag
ttctaccccacaataactatagtgatagctgatgacaccagggatcctaaacctgtaact
ggaccctacatcgaacattatatcatgccctttggcaagggctggtttgctgggcgtaat
ctggcagtctctcaggtaacaaccaaatatgtgctttgggtggatgatgacttcattttc
acctcaagcaccaaactggaaaagatggtggatattttggagagaaccactttggacctg
gtggggggagcagtcagagaagtgacgggatacactgccacctatcgacacaccatctcc
acagacgcaggtgataaagaaggagattgcttacacataaggacaggattccaccacgcc
atcgagggattttccaattgtgttgttgcagatgctgttataaattttttcatggctcgc
acagaaaagatgcgagaagtaggctttgaccctcgtctggctcgagttggccatttagca
ttttttattgatgggcttggctcccttcatgtgggctcctgtgatgatgttattatcagt
catgcatcgaagatcaaggcgatgttgccatggggacagtctgagactgacaaagcctat
tccaagttccgttatcattccactgaagattccacctctatgaatgaatacgatctttat
tatctcaagaatcattttaaatgtgtcactagcgactaa
DBGET
integrated database retrieval system
