Squalius cephalus (European chub): 307147995
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Entry
307147995 CDS
T11930
Symbol
pomca
Name
(RefSeq) proopiomelanocortin a
KO
K05228
proopiomelanocortin
Organism
scep
Squalius cephalus (European chub)
Pathway
scep04080
Neuroactive ligand-receptor interaction
scep04081
Hormone signaling
scep04082
Neuroactive ligand signaling
scep04916
Melanogenesis
scep04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
307147995 (pomca)
04082 Neuroactive ligand signaling
307147995 (pomca)
04081 Hormone signaling
307147995 (pomca)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
307147995 (pomca)
04916 Melanogenesis
307147995 (pomca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
scep04052
]
307147995 (pomca)
Cytokines and neuropeptides [BR:
scep04052
]
Neuropeptides
GPCR binding
307147995 (pomca)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPP
Op_neuropeptide
ACTH_domain
HR1_TOCA
Motif
Other DBs
NCBI-GeneID:
307147995
NCBI-ProteinID:
XP_079709276
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All DBs
Position
20:25799194..25801311
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AA seq
217 aa
AA seq
DB search
MVRMLCPAWLLALAVLCAGGCEVRAQCWENTRCRDLNTEESILECIQLCKSDLTDETPVY
PGESHLQPPELEQNEVLAALSPVALAPAEQMDPESSPRHEHKRSYSMEHFRWGKPVGRKR
RPIKVYTNGVEEESAENLPAEMRRELATNEVDYPQEENALNQQKKEGTYKMRHFRWSSPP
ASKRYGGFMKSWDERSQKPLLTLFKNVINKEHQRKDQ
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggatgttgtgtcctgcttggctcttggctctggctgtactgtgtgcgggcggc
tgtgaagttagagctcagtgttgggaaaacactcgatgcagagacctcaacactgaggag
agcatcttggaatgcatacagctatgcaagtctgatctgacagatgaaacccccgtctac
cccggagaaagccatttgcagcctcccgagctggagcaaaacgaggtcctcgcagccctg
tccccagttgccctcgcaccggctgagcaaatggacccagagtccagccctcggcacgag
cacaagcgctcttactccatggagcatttccgctgggggaagccggtgggtcgcaagcgc
cggcccatcaaggtgtacacgaacggcgtggaggaggaatctgctgagaatctcccggct
gagatgaggcgcgagctggcaaccaacgaggtcgactatccacaggaggagaacgcttta
aaccaacagaagaaggagggcacctacaaaatgagacatttccgctggagcagcccgcct
gctagcaaacgctacggaggcttcatgaagtcctgggacgagcgcagtcagaaacccctt
ctcacactcttcaaaaacgtcataaacaaagagcaccagaggaaggaccagtga
DBGET
integrated database retrieval system