Squalius cephalus (European chub): 307151073
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Entry
307151073 CDS
T11930
Symbol
fads2
Name
(RefSeq) acyl-CoA 6-desaturase isoform 1
KO
K10226
acyl-CoA 6-desaturase (Delta-6 desaturase) [EC:
1.14.19.3
]
Organism
scep Squalius cephalus (European chub)
Pathway
scep00592
alpha-Linolenic acid metabolism
scep01040
Biosynthesis of unsaturated fatty acids
scep01100
Metabolic pathways
scep01212
Fatty acid metabolism
scep03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09100 Metabolism
09103 Lipid metabolism
00592 alpha-Linolenic acid metabolism
307151073 (fads2)
01040 Biosynthesis of unsaturated fatty acids
307151073 (fads2)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
307151073 (fads2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
scep01004
]
307151073 (fads2)
Enzymes [BR:
scep01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.19 With oxidation of a pair of donors resulting in the reduction of O2 to two molecules of water
1.14.19.3 acyl-CoA 6-desaturase
307151073 (fads2)
Lipid biosynthesis proteins [BR:
scep01004
]
Desaturase
Front-end
307151073 (fads2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FA_desaturase
Cyt-b5
DUF5318
Motif
Other DBs
NCBI-GeneID:
307151073
NCBI-ProteinID:
XP_079714995
LinkDB
All DBs
Position
23:25232503..25245715
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AA seq
444 aa
AA seq
DB search
MGGGGQQTDRITETNGRFSTYTWEEVQKHTKFGDQWIVVERKVYNVSQWVKRHPGGVRIL
GHYAGEDATEAFTAFHPDLPLVRKYMKPLLIGELDASEPSLDRQKNAALAEDFRALRERL
EAEGCFKTQPLFFILHLSHILLLEAIALMMVCYFGTGWINTAIVAVLLATAQSQAGWLQH
DFGHLSVFKTSRWNHLVHKFVIGHLKGASAGWWNHRHFQHHAKPNVFKKDPDVNMLNAFV
VGKVQPVEYGVKKIKHLPYNHQHKYFFFIGPPLLIPVYFQVQIFHNMISHGLWWDLAWCI
SYYVRYFLCYTQFYGVFWAVVLFNFVRFMESHWFVWVTQMSHIPMNIDYEQHQDWLSMQL
VATCNIEPSSFNDWFSGHLNYQIEHHLFPTMPRHNYWRAAPHVRELCAKYGVKYQEKTLH
GAFADIIRSLEKSGELWLDAYLNK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcggaggacagcagacggaccggatcaccgaaaccaatgggaggttcagcact
tacacctgggaggaggtgcagaaacacaccaagtttggagatcagtggatcgtggttgaa
aggaaggtttataatgtgagccagtgggtgaagagacaccccgggggagtgaggatcctc
ggacactatgctggagaagatgcgacggaggcgtttactgcatttcatccagaccttccg
ctggtgagaaaatacatgaagccgctgttaatcggggagcttgatgcatctgaacccagt
ctagaccggcagaaaaatgcggctcttgcggaggatttccgagcccttcgtgagcgtctg
gaggctgaggggtgtttcaaaacccagccgctgtttttcatcttacatctgagtcacatc
ctgctcctggaggccatcgctctgatgatggtgtgctactttggaaccggctggatcaac
acggccatcgttgctgttctactggcgactgcacagtcgcaggctggatggttgcagcac
gacttcggtcatctgtccgtgtttaaaacctctcgatggaatcatcttgtgcacaaattt
gtcatcggacacctgaagggagcatctgcgggttggtggaaccatcgccacttccagcat
catgctaaacccaacgtgttcaaaaaggacccggacgtcaacatgctcaatgcgtttgtg
gttggaaaagtgcagcctgtggagtacggcgttaagaagatcaagcatctgccttacaac
catcagcacaagtacttcttcttcatcggacctcctctgctcattccagtgtatttccag
gtccagatctttcacaatatgatctcacatggtctttggtgggacctcgcgtggtgtata
agttactacgttcgatacttcctgtgttacacgcagttctacggtgtgttttgggcggtg
gttctgtttaatttcgtgaggttcatggagagccactggttcgtgtgggtgactcagatg
agccacatccccatgaacatcgactatgagcaacaccaagactggctcagtatgcagctg
gtcgcaacctgtaacattgagccatcctccttcaacgactggttcagcggacacctcaac
tatcagatcgagcaccatctcttccccacaatgcctcggcacaattactggcgcgccgcc
ccacacgttcgagagttatgtgccaaatacggagtcaagtaccaagagaagaccttgcac
ggggcctttgcggacatcatcaggtctttggagaaatccggagaactctggctggatgcg
tacctcaacaaataa
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