Squalius cephalus (European chub): 307153257
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Entry
307153257 CDS
T11930
Symbol
tnfrsf11a
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11A
KO
K05147
tumor necrosis factor receptor superfamily member 11A
Organism
scep
Squalius cephalus (European chub)
Pathway
scep04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
307153257 (tnfrsf11a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
scep04050
]
307153257 (tnfrsf11a)
04090 CD molecules [BR:
scep04090
]
307153257 (tnfrsf11a)
Cytokine receptors [BR:
scep04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
307153257 (tnfrsf11a)
CD molecules [BR:
scep04090
]
Proteins
307153257 (tnfrsf11a)
SSDB
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GFIT
Motif
Pfam:
TNFR_c6
RANK_CRD_2
ODV-E18
Motif
Other DBs
NCBI-GeneID:
307153257
NCBI-ProteinID:
XP_079718686
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All DBs
Position
25:13355664..13371749
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AA seq
576 aa
AA seq
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MRVNFSASWIFQGWITHFVLALCTQAGLAISCQQNEYEHNGGCCQKCEPGKYIVSHCDGS
PTMCRDCARDEYQPDWNSDTKCIRQKFCDEGKGFNRTLPHNPTAAEPCRCKQGFHCSLIN
CEYCEAIQRCPAGEGVVMGETGRASCVTCLPGFFSDSESIESCKKWTDCKAIGKTEKQPG
STETDVVCGLHSPGMTPWVLVAILSVIIVVSLVVLFLFCCKDKLNFLSVNLRTCVQNLKG
SRNRQETVTSYHFKNGLQTHPLICQERTPPESLIMCPSTTLTIPEMSDCTDQDQDRAETS
SGSSSVDSGCGPSSPLSGSSCSCVLSMKEPIEVGENEDCSQLVATGLASCSSCRTGDATG
NVQVIGLKEPLLCESCSLDGPPACDYVDLQRSQELYLDYSSPAGKEAMSEMRGVNGDRGL
VEGLYRQNEPCCCSIDSTTVPPLPSVSANDQGLSLIHSDDRKLSDPDAEYQNQCSDAALT
SGQVTGNNNTTFISSGQVMNFSGEVIVVYVSQTSLGSSGGTDEPFSCPVQEQSNEDSFPS
EPKSNASTTPQAKSTNGHVEKHLPVQEMTNDWSWQK
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgagagtgaatttttcagctagttggatatttcaaggatggatcacacacttcgtcctt
gctctatgcacgcaggcaggactggccataagctgccaacagaacgagtacgagcacaat
gggggatgctgccaaaaatgtgaaccaggaaaatacatcgtttcccattgcgacgggagt
ccgacaatgtgccgtgattgtgcccgtgatgagtaccagccggactggaacagtgacact
aagtgtattcgtcagaagttctgcgatgaggggaaaggatttaaccgtacccttccacac
aaccccaccgcggcggaaccgtgtcggtgcaagcagggcttccactgctccctgatcaac
tgcgagtactgtgaggccattcaaagatgtcctgctggagaaggagtcgtgatgggtgag
actggcagagcttcctgtgtgacttgcctacctggatttttctcagattctgaatcaata
gaatcctgcaagaaatggacagattgtaaagcgattggcaagaccgaaaaacagccagga
agcactgagacagatgtagtgtgtggactccattctcctggtatgacaccctgggtgctt
gtggccatcctctcggtcatcatcgtggtatctctggtcgttctcttcttgttttgctgc
aaagataagctgaacttcctctcagtaaatctacgcacctgcgtccaaaacctaaaagga
agcaggaatcgacaggaaactgtgacttcatatcactttaaaaacggtctgcaaacccac
cctttaatctgccaagaaagaacccctccggagtccctgatcatgtgtcccagcaccaca
ttaaccatcccagaaatgtcagattgcacggaccaagatcaggaccgagccgaaacctcg
tcggggagctccagcgtggactccggatgcgggccgtcgtcccccctgtcaggaagctcc
tgcagctgtgtgctttccatgaaggagcccatagaggtgggagagaacgaggactgcagt
cagctggtcgccacgggcctggcgtcgtgcagctcctgcaggacaggggacgccacggga
aacgtgcaggttatcggcctgaaagagcctctgctgtgtgagagctgctcgctggacggc
ccgcccgcatgcgattacgtggatctgcagcgctcgcaggaactctacctggactacagc
agccctgctggcaaggaagccatgtcggagatgagaggcgtcaacggggaccgaggtttg
gtcgaggggctgtatagacagaacgaaccttgttgctgcagcatagactccaccaccgtt
ccccctttgccgtctgtcagcgctaatgaccagggcctttcactgatccacagcgatgac
cgcaaactgtcggaccctgacgcggagtaccagaaccagtgctcggatgccgccctcaca
tccggtcaggtgacaggaaacaacaacactacttttatctccagcgggcaggtgatgaat
ttcagcggcgaggtcatcgtggtctacgtcagtcagacatcactgggcagcagcgggggg
acagacgaacccttcagctgcccggttcaggaacagtctaacgaggacagctttccaagt
gaacccaaatctaacgcgagcacaacaccgcaggccaagagcacaaacggacacgtggaa
aaacacctgcccgtacaggaaatgaccaacgactggtcctggcagaaataa
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