Squalius cephalus (European chub): 307155042
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Entry
307155042 CDS
T11930
Symbol
mmp2
Name
(RefSeq) 72 kDa type IV collagenase
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
scep
Squalius cephalus (European chub)
Pathway
scep04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
307155042 (mmp2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
scep01002
]
307155042 (mmp2)
Enzymes [BR:
scep01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
307155042 (mmp2)
Peptidases and inhibitors [BR:
scep01002
]
Metallo peptidases
Family M10
307155042 (mmp2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_5
DUF4953
Motif
Other DBs
NCBI-GeneID:
307155042
NCBI-ProteinID:
XP_079721480
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All DBs
Position
3:complement(24489751..24514323)
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AA seq
657 aa
AA seq
DB search
MTCFKFFSCRHIVLKVFLVQFLASLLTFAAPSPIIKFPGDDTSHTDKEVALHYLNKFYGC
PKDRCNLMVLKDTLKKMQKFFALPETGDIDQKTVEIMKKPRCGVPDVANYNFFHRKPKWG
QKNITYRILGHTPDLDEETIDDAFYRAFKVWSDVTPLNFTRIMDGEADIMINFGRNEHGD
GYPFDGKDGLLAHAFAPGPGIGGDSHFDDDELWTLGEGQVVKVKYGNAEGEFCKFPFLFM
DKEYTSCTSQGRDDGFLWCSTTYNFDEDGKYGFCPHELLFTLGGNADGAPCKFPFTFQGD
KYDSCTTSGRDDGYRWCATTEDYDRDKSYGFCPETAMSTVGGNSEGAPCVFPFKFLGNTY
DSCTTSGRSDGKMWCAVTKSFDDDRKWGFCPDQGYSLFLVAAHEFGHALGLEHSEDPGAL
MAPIYTFTKTLSLSNDDVKGIQELYGEPTDKPLPPHIPPVTPMDVCNENIIFDAVAQIRG
EIFFFKDRFLFRSADVRRKPTGPMLVATFWSELPEKIDAAYENPLEEKTVFFADDEMWVY
SASTLERDYPKKISSMGLPSDLHRIDAAYSFHKSKKTYLFAGNKFWRYNEAKKKMDPGFP
KLIADSWSAVPDDIDAALSLVSDGHSYFFKDSHYLKMDDSTLKIVKVGEVKKDWLRC
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgacgtgctttaagtttttcagctgtaggcatattgtccttaaagttttcctcgtgcag
tttcttgcttccctgctaacttttgctgcgccctcacccatcataaagttcccaggcgat
gatacttctcacacggacaaagaagtggccctgcactacttaaataagttctatggctgc
ccaaaagacaggtgtaatctgatggtgttgaaggacacactgaagaagatgcagaagttt
tttgctttaccagagacaggggatattgatcagaagacagtagagatcatgaagaaacca
cgatgtggagttcctgatgtggccaattacaatttctttcacaggaagcccaagtgggga
cagaaaaacattacttacaggatcttagggcacaccccggatctggacgaggaaacaatt
gatgatgctttctatcgtgcatttaaagtctggagtgatgtcacacctctgaacttcacc
aggatcatggatggagaagctgacatcatgattaactttggccgaaatgaacatggtgat
ggttacccatttgatgggaaggatggtctgctggctcatgccttcgcccctgggcctggt
attggaggagattctcactttgatgatgatgagctgtggacattaggagaaggacaagtg
gtaaaggtgaagtacggtaatgctgagggggagttttgtaagtttccattcttgttcatg
gataaagagtacaccagctgcacctctcagggtcgagatgatgggttcctttggtgctct
accacatacaactttgatgaagatggaaagtatggcttctgtcctcatgagctcttgttc
accttgggtggaaatgcagatggagcaccttgtaagttcccattcactttccagggagat
aaatatgatagctgcaccacctcaggcagggatgatgggtaccgttggtgtgccaccact
gaagattatgaccgtgacaagtcttatggattctgtcctgagacagcaatgtcaacagtc
ggaggaaattcagaaggtgcaccctgtgtcttcccctttaaatttctgggcaacacatac
gactcctgcaccacgtcgggacgcagtgatgggaagatgtggtgcgccgtgaccaaaagc
tttgatgacgaccgcaagtggggtttctgtcctgaccaaggctacagtctattcctggtg
gcggcccatgagtttggtcatgccctgggtttggagcactctgaggaccctggagctctc
atggctcctatctacacattcaccaaaaccttaagtttgtctaatgatgacgttaaaggc
atccaggagctctatggcgagccaacagacaaaccattgccccctcacatcccaccggtc
acgccaatggatgtatgtaatgaaaacatcatatttgatgccgtagcccaaatcagagga
gagatcttcttctttaaggacagattcctcttcaggtcggctgatgtcagaaggaagccg
acaggccccatgctggtggctacattctggagtgaacttccagagaagattgatgcagct
tatgagaatcctctggaggagaagactgtcttctttgcagatgatgagatgtgggtatat
tctgccagtactctggagagagactatcccaagaagatctccagcatgggtcttccttca
gatttgcatagaattgatgctgcctactcgttccacaagagcaagaagacttacttattt
gctggcaacaagttctggaggtacaatgaagccaagaaaaagatggatccaggcttccct
aaacttattgcggattcttggagtgctgttcccgatgacatagatgccgccctcagcctt
gttagtgatggtcacagctacttcttcaaagactcccactatctcaaaatggatgacagc
actctgaaaattgtcaaagttggggaggtcaaaaaggactggctacgctgctga
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