Squalius cephalus (European chub): 307165861
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Entry
307165861 CDS
T11930
Symbol
vdrb
Name
(RefSeq) vitamin D3 receptor B isoform 1
KO
K08539
vitamin D3 receptor
Organism
scep Squalius cephalus (European chub)
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
scep01009
]
307165861 (vdrb)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scep03000
]
307165861 (vdrb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
scep03310
]
307165861 (vdrb)
Protein phosphatases and associated proteins [BR:
scep01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
307165861 (vdrb)
Transcription factors [BR:
scep03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
307165861 (vdrb)
Nuclear receptors [BR:
scep03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
307165861 (vdrb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PCF11_charged
Motif
Other DBs
NCBI-GeneID:
307165861
NCBI-ProteinID:
XP_079740021
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All DBs
Position
10:<11348194..11369882
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AA seq
499 aa
AA seq
DB search
MCVCVCVCVRAQSLPVNAVGFVRVSVFCLWNVGVVPTRFTNNRPVQTVLAWQRMSHQPKQ
RTNAHSTVFGGKSAVQVMESAVSTSTQVPDEFDRNVPRICGVCGDKATGFHFNAMTCEGC
KGFFRRSMKRKASFTCPFNGSCTITKDNRRHCQACRLKRCLDIGMMKEFILTDEEVQRKK
DLIQRRKDEEAQREAQKPRLSEEQRNIIDTLVDAHHKTYDDSYSDFSRFRPPVREGPVTR
SASRAASLHSLSDASSDSFSHSPESGDCKMNLSNLLMMYQEQGLSSSPDSKEDEGSGLSM
LPHLADLVSYSIQKVIGFAKMIPGFRELTAEDQIALLKSSAIEVIMLRSNQSFSLEDMSW
SCGGPDFKYCVNDVTKAGHTLELLEPLVKFQVGLKKLNLHEEEHVLLMGICLLSPDRPGV
QDHVRVEALQDRLSEVLQAYILAHHPGGRLLYAKMIQKLADLRSLNEEHSKQYRSLSFQP
EHSMQLTPLVLEVFGGQVT
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgtgtgtgtgtgtgtgtgtgcgcgcgcagtctctgcctgtgaatgcagtgggg
tttgtgcgtgtgagtgtgttttgcttgtggaatgtgggagttgtccccacgcgctttacg
aacaaccgacctgtccaaacagtgctcgcgtggcagaggatgtcacaccaaccaaaacag
cggacgaacgctcacagcacagtctttggaggaaaatccgccgtacaggtgatggagtca
gccgtaagtacatccactcaagtgccagatgagtttgaccgtaatgttccacggatctgt
ggtgtgtgtggagacaaagccactggctttcactttaatgcgatgacctgcgagggatgc
aaaggcttcttcaggcgcagtatgaagcggaaggccagttttacctgtccttttaatgga
agctgcaccatcactaaagataaccgtcgccactgccaggcctgcagactcaagcgttgc
ctggatattggcatgatgaaagagtttatcctgacggatgaagaggttcagaggaaaaag
gatctgatccagaggagaaaggatgaggaggcacagagggaggcgcagaagccccggctc
tcagaggagcagcgcaacatcatcgacacgctggtggatgcgcatcacaaaacctatgac
gattcctactctgacttctcacgtttcagacctccagttagagagggtccagttacacgt
agtgccagccgagccgcgtctcttcattcactatcagacgcctcctcagactccttcagc
cactctccagagtcaggagattgtaagatgaacctgagtaatctgttgatgatgtatcag
gagcagggtttgagctccagtccggactcaaaggaggatgagggctccggtctttccatg
cttcctcacctggccgacctggtttcctacagcattcaaaaagtcatcggctttgctaag
atgattcctggattcagagagctgacagctgaagatcagattgctttgctaaagtccagt
gctatagaagtgatcatgctaaggtctaaccagtctttcagtctagaggacatgagttgg
agctgtggaggaccagattttaaatactgcgtcaatgatgtgacaaaagctggacacact
ctggagctgttggagcctctggtgaagtttcaggtgggcttaaaaaagctcaacctacat
gaggaggaacatgtgctgctgatgggcatttgtctgctgtctccagaccggcccggtgtg
caggaccacgtgcgagtggaagcgttgcaggacaggttatctgaggtcctgcaggcgtac
atcctcgcgcatcaccctgggggccgtctgctctatgctaagatgatccagaagctggcg
gacctccgtagcctgaacgaagagcactccaagcagtaccgctccctttctttccagccc
gaacacagcatgcagctgacccctctggtgttggaagtattcggaggacaggtcacctag
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