Streptococcus parasanguinis FW213: Spaf_1227
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Entry
Spaf_1227 CDS
T02115
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
scf
Streptococcus parasanguinis FW213
Pathway
scf00550
Peptidoglycan biosynthesis
scf01100
Metabolic pathways
scf01502
Vancomycin resistance
scf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
scf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Spaf_1227
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Spaf_1227
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Spaf_1227
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
scf01002
]
Spaf_1227
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
scf01011
]
Spaf_1227
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
scf01504
]
Spaf_1227
Enzymes [BR:
scf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
Spaf_1227
Peptidases and inhibitors [BR:
scf01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
Spaf_1227
Peptidoglycan biosynthesis and degradation proteins [BR:
scf01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
Spaf_1227
Antimicrobial resistance genes [BR:
scf01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
Spaf_1227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VanY
Conotoxin
Macoilin
Apis_Csd
DUF1244
Serinc
LPAM_1
Piezo_TM1-24
Motif
Other DBs
NCBI-ProteinID:
AFJ26211
UniProt:
I1ZMD7
LinkDB
All DBs
Position
complement(1229830..1230609)
Genome browser
AA seq
259 aa
AA seq
DB search
MKARFSKLTLVTVALLTLTACSQSQSTSSKSSAKEESKQTQTKSSKEMSSAKDTSKETGK
EESSKAGKSDVKVDSGVSYNGSYYSVKGKYGEVMIANKHYPLSPDFNPGEDPEAVSALHE
LIAAMQAEGYPISDQYSGFRSYDTQVGLYQNYVNQDGQEAADRYSARPGYSEHQTGLTFD
LIDTSGNLVTEPGPSKWLLKNAAKYGFVVRYQEGKEKVTGYMPESWHLRYIGKEAQDIAD
SGLSLEEYYGFTGGDYVDK
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaagattttccaaattaactttggtgacagttgccttgttaaccctgacagct
tgctcccaatctcaatccactagttctaaatcttctgcaaaagaagaaagcaaacaaacg
caaaccaagtcttccaaagaaatgtcttctgcaaaggatacgtcaaaagagactggcaaa
gaagagtcttcaaaagctggtaagtcagatgtgaaagtggactctggtgtcagctataat
ggttcttactatagtgtcaaagggaaatatggtgaggtcatgattgccaacaaacattat
cccttgtcgcctgactttaacccaggtgaagatcctgaagctgtttcagcccttcatgaa
ttgatcgcagccatgcaggcagaaggttatccaatcagtgaccaatatagtggttttcgt
agctacgacacccaagttggtctctaccaaaactatgtcaatcaagatggtcaggaagcc
gccgatcgttattctgcaagaccgggttatagtgaacaccagacaggtttgacctttgat
ctgatcgataccagtggtaatttggtaaccgaacctggaccaagtaagtggttgctcaag
aatgctgctaaatatggctttgtggttcgttaccaagaaggaaaagaaaaagtaacaggc
tacatgccagaaagctggcatctccgctatatcggaaaagaagcgcaagatattgctgac
tcaggtttgagtctggaagaatactatggcttcaccggtggcgattacgttgataaataa
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