Streptococcus constellatus subsp. pharyngis C1050: SCI_0532
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Entry
SCI_0532 CDS
T02832
Symbol
nth
Name
(GenBank) putative endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
scg
Streptococcus constellatus subsp. pharyngis C1050
Pathway
scg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SCI_0532 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scg03400
]
SCI_0532 (nth)
Enzymes [BR:
scg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SCI_0532 (nth)
DNA repair and recombination proteins [BR:
scg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SCI_0532 (nth)
Prokaryotic type
SCI_0532 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
Nup54_57_C
EndIII_4Fe-2S
TRAPPC9-Trs120
Motif
Other DBs
NCBI-ProteinID:
AGU79490
LinkDB
All DBs
Position
523422..524045
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AA seq
207 aa
AA seq
DB search
MVLSKKRARKVIEEIIALFPDAKPSLNFRNHFELLVAVILSAQTTDAAVNTVTPTLFKAY
PTPLEMAVASESEIASYIARLGLYRNKAKFLKKCAQQLLDDFDGQVPHTRKELESLAGVG
RKTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLDVEQRVMEVLPKNEWLPAHQ
AMICFGREICHPRNPKCDQYPQLYHFD
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atggttttatcaaaaaaacgtgcacgaaaggtgattgaggagataattgccctatttcca
gatgccaagcccagcctaaattttagaaatcattttgaattgctggtagcggtcatattg
tcagctcaaacaacagatgcagcggttaatacggttacaccaaccctttttaaagcttat
ccgactccattagaaatggctgtggcgtcagaaagcgaaattgctagctatatcgctcgt
ctgggactgtatcgtaataaagctaaatttttgaaaaaatgtgctcagcaattgctcgat
gactttgatggtcaagttcctcatacacggaaagaattagaaagtttggctggtgtaggg
cgtaaaacagcgaatgtggtcatgagtgttggatttggtattcccgcttttgcagtggat
acccatgtggagcgaatctgcaaacaccatgatattgtcaaaaagtcagctaccccgcta
gacgttgaacaacgagtgatggaagttttacccaaaaatgaatggttgcctgcgcatcag
gctatgatttgctttggacgcgaaatttgccatcctagaaatcctaaatgcgaccaatat
ccgcagttgtaccattttgattga
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