KEGG   Sphingobium chlorophenolicum: Sphch_4154
Entry
Sphch_4154        CDS       T01522                                 
Name
(GenBank) TRAG family protein
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
sch  Sphingobium chlorophenolicum
Pathway
sch03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sch00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Sphch_4154
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sch02044]
    Sphch_4154
Enzymes [BR:sch01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     Sphch_4154
Secretion system [BR:sch02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   Sphch_4154
SSDB
Motif
Pfam: T4SS-DNA_transf TraG-D_C TrwB_AAD_bind
Other DBs
NCBI-ProteinID: AEG51732
UniProt: F6F473
LinkDB
Position
pSPHCH01:complement(80095..82059)
AA seq 654 aa
MPVQRSFWMIGLSVAGGTLLCCAIAVLVALFGLGQIGSHTDLTALPAWLWYYRADPLLIL
WLKRGALAGAVVVGLLAIGILRRGPALHGTARFAREGEIRREGLRAASGIVVGRKAGRFL
IFGGSEHVLLEAPTRAGKGVGVVIPNLLTWPDSVVVLDVKRENWGASAGYRARAGQAVHL
FDPLDAEGRTARYNPLAHIRRTDDIEVVNELQKIAGMLFPAPERSDPFWAEAARAAFVGV
GALVASNPGLPFTIGEIYRRLTSGDPKSDLPATLQEARRVGQRLSQACVSAIQDFTSASD
NTFSGIKQTITARLNLWLNPMVDAATSESDFDLREVRRRRMSIYLGVSPDNIDRIAPIYS
LFLQQLVDLNTRDLPEGATNVPVLVLLDEFARLGKASVIASGFSYVAGYGLRLVPVIQSR
SQLRAIYGPDVTDEIIANCGLEVVFTPKELKVANELSERLGFFTMNVKSRSRTIHGLLAN
RSISESDQRRALLLPQELMQLPKNELLLLRAGIPPIRGRKIAYYRMPRFTRRVVAPPVLS
ARPIAAMLSPPAPASARQGAGTPGLSGAPQQPATSSGGTIQEEIVMREMTDAELAGAAEI
TDDMLVLGDLAELPPPGDEAAAIAFVSAMVERALVPAVGQASTSIIQERTAHVR
NT seq 1965 nt   +upstreamnt  +downstreamnt
atgccggtgcagcgtagcttctggatgatcggcctgtccgttgccggcggcaccttattg
tgctgcgccatcgccgtgctggttgccctctttgggctgggccagatcggctctcacacc
gacctcacggccttgcccgcatggctgtggtactatcgggcggacccactgcttattctt
tggctaaagcgcggggcgctggcgggcgcagttgtggtcgggctcctcgcgattgggatt
ctgcgccgcgggccggcattgcacggcaccgcccggtttgcgcgcgaaggcgagatccgg
cgggagggccttcgcgccgcgtccggcatcgttgtcggccgcaaggctggacgtttcctg
atattcggcgggagcgagcatgttctgctcgaggcacccacacgagcgggcaagggcgtg
ggcgtcgtcattcccaatctgctgacctggccagattcggtggtcgtgctcgacgtgaaa
cgggagaactggggcgcaagcgcggggtatcgtgcacgggccggccaggccgtgcatctg
ttcgatccgctcgacgcggaggggcggacggcgcggtacaaccccctggcgcacatcaga
cggactgatgacatagaggtcgtcaacgagctgcagaagatcgcgggcatgcttttcccc
gcgcccgagcgatccgatcccttctgggcggaggccgcgcgagcggcctttgtcggcgtc
ggcgccctggtcgcatccaacccgggcctgcccttcaccatcggcgagatataccgccgc
ctcacgagcggggatcccaagagcgaccttcccgcaacgcttcaggaagcccgcagggtg
ggccagcgcctcagccaagcgtgcgtgtccgcgatccaggatttcacctcggcctcggac
aacaccttttccgggatcaagcagaccatcaccgcgcggctcaatctctggctcaacccc
atggtggatgccgccacctcggaaagcgacttcgacctgcgcgaggtacggcgtcggcgc
atgtcgatttaccttggcgtgtcgcccgacaatatcgaccgcatcgcgccgatctacagc
ctgttcctgcagcaactcgtggatctcaacacccgcgatcttcctgagggcgcgaccaat
gtcccggtcctggtcctgctcgacgagttcgccaggctcggcaaagcctcggtgattgcg
agcggcttttcctatgtcgccggctatggcctacgtctggtcccggtcattcagagccga
tcccagcttcgcgcaatctatggtcccgatgtcaccgacgagatcatcgccaattgcggg
ctcgaggttgtcttcacgcccaaggagctaaaggtcgcgaacgaactttccgaacggctc
ggctttttcacgatgaacgtgaaatcccgcagccgtaccatccacgggctgctggcgaac
cggagcatctcggaatctgatcaacgccgcgcgctcctactgccgcaagagctcatgcag
ctgccgaagaacgagctcctgctccttcgcgccggcatccccccaattcgagggcgcaag
atcgcctattaccggatgccccgcttcacgcggcgggtggttgctccgcctgtgctgtcc
gcccgtccaatcgctgcaatgctttccccacctgcaccggcttcagcgcggcagggcgcg
ggcacacccggtctgagcggcgccccacagcaaccggcgacaagctcgggcgggaccata
caggaggaaattgtgatgcgggaaatgaccgacgccgagctagcaggtgcggccgagatc
acggatgacatgctggttctgggcgacctggccgaactgccgcccccgggcgacgaggcc
gccgcgatcgccttcgtgtcggcgatggtcgagcgggcgcttgtgccagcggtcgggcag
gcatccacatccattatccaggaaaggacagcccatgtccgctga

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