Shewanella chilikensis: GII14_21680
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Entry
GII14_21680 CDS
T08813
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
schk
Shewanella chilikensis
Pathway
schk01501
beta-Lactam resistance
schk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
schk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GII14_21680
01503 Cationic antimicrobial peptide (CAMP) resistance
GII14_21680
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
schk02000
]
GII14_21680
01504 Antimicrobial resistance genes [BR:
schk01504
]
GII14_21680
Transporters [BR:
schk02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
GII14_21680
Antimicrobial resistance genes [BR:
schk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GII14_21680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QIJ06518
UniProt:
A0A6G7LXL8
LinkDB
All DBs
Position
complement(4799261..4802392)
Genome browser
AA seq
1043 aa
AA seq
DB search
MARFFIDRPIFAWVIAIIIMLAGVLTIKALPVSQYPDIAPPTIVVAANYPGASAKTVEDS
VTQVIEQRMTGLDHLRYIKSTSDSFGNAEITLTFNAEADPDIAQVQVQNKLQAAMALLPQ
EVTAQGVRVNKSSSGFLMVVAFISEDGSMTKADLADYVGSNVQDPMSRVPGVGETTLFGA
QYSMRIWVDPLKLTNYNLTTLDVIAAIREQNAQVSAGQLGGAPAVQGQELNATISAQSRL
QTPEEFRNIILKSNASGANVYLGDVAKVELGSESYAIESLYNGRPATGLAIKLATGANAL
DTAEAVRAKVEEMRPFFPAGMQVVYPYDTTPFVKNSIEGVVHTLLEAVVLVFVIMYLFLQ
NFRATLIPTIAVPVVLLGTFAILSFTGFSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
SEEGLSPKEATRKSMGQITGALVGIGLTLSAVFVPMAFMSGSTGVIYRQFSITIVSAMAL
SVLVAIVLTPALCATMLKPLKKGHTHAETGFFGWFNRNFDRMTGKYEGTVAGIIKRSVRM
SAIYLALVVAVGWIFIRMPTAFLPDEDQGILFTQAILPTNATQESTLKVLEKVSDQFLAD
ENVKSVLSVAGFSFAGQGQNMGIAFVGLKDWSERTAPGSDVQAVAGRAMAVFSQMKEAFV
FAFVPPAVIELGTANGFDLFLQDKNGQGHEKLVQARNQLLGMAAQNPNLVGVRPNGQEDA
PMYQLHIDHAKLRALSVNIGDVNNVLSAAWGGSYVNDFIDRGRVKKVYVQADAKYRMQPE
DLDSWYVRNTQGDMVPFSAFATGSWEYGSPRLERFNGLPAMNIQGATVPGFSTGEAMNIM
EGMVDQLPPGFGIEWNGLSYEERLSGNQAPALYALSILVVFLVLAALYESWSVPFAVILV
VPLGIIGALIAMNGRGLPNDVFFQVGLLTTVGLATKNAILIVEFAKEYYEQGAKLIDATL
HAVRVRLRPILMTSLAFGLGVVPLAVSTGVGSGSQNAIGTGVLGGMISSTFLGIFFIPLF
FVVVERMFSKREREERKLRRQAK
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtttctttatcgatcgccccatcttcgcatgggtgatcgcgattattatcatg
ctggcaggtgtcctgaccattaaggccctgccggtttcccagtacccggatattgcgccg
ccaaccattgtggttgctgccaactatccaggtgcgtcggccaaaactgttgaagactct
gtgacccaggtgattgaacagcgcatgacaggtctagaccacctgcgctatatcaagtcc
accagtgacagcttcggtaacgccgaaatcactctgacctttaacgccgaagcggatccc
gacatcgcccaggttcaggttcagaacaagctgcaggccgccatggccctgctgcctcag
gaagtaacggctcaaggtgtccgggttaacaaatccagctccggcttcctgatggtagtc
gcctttatttctgaagacggctccatgaccaaggccgacctcgccgattacgtaggttcc
aacgttcaggaccccatgagtcgtgtgcccggtgtgggtgaaaccaccctgttcggtgcc
cagtactcaatgcgtatctgggtcgacccactgaagctgaccaactacaacctgactact
ctggacgtgatcgccgcgatcagagaacaaaacgcccaggtttctgccggtcagctgggt
ggtgccccagcggttcaaggccaggagttgaatgcgactatctcggcccagagccgtttg
cagacgcctgaggaattccgcaacatcatcctcaagtccaacgcttcgggcgccaacgtc
tatctgggcgatgttgccaaggttgagctgggttccgagagttacgccattgagtcactc
tataacggtcgccccgctacaggtttggcaatcaagctggctaccggtgccaacgcgctg
gatactgcagaagctgttcgcgccaaagtcgaagagatgcgtcccttcttcccggccggc
atgcaggtggtgtatccctatgacacaacccccttcgtgaagaactctatcgaaggtgtg
gttcatactctgctggaagccgtggtactggtgttcgtcatcatgtatctgttcctgcaa
aacttccgcgccaccttgatcccaacgatcgccgtgcctgtggttttgctgggtaccttc
gccatcctgtccttcaccggattctcgatcaacaccctaaccatgttcgccatggtactg
gctatcggtctcttggtggatgacgccattgtggtggtggagaacgttgagcgggtgatg
tcggaagagggacttagtcccaaagaagcgaccaggaagtccatgggccagatcaccggc
gcactggtgggtatcggtctgacactgtcagctgtgtttgtacctatggccttcatgtcg
ggttctaccggggttatttaccgtcagttctccatcactatcgtatcggcgatggccttg
tcggtattggtggcaatcgtactgactccggcgctctgtgccactatgctcaaaccgttg
aagaaagggcatacccacgcagaaaccggtttcttcggttggtttaaccgtaacttcgat
cgcatgactggtaagtacgaaggtactgttgccggcatcatcaaacgttcggtacgtatg
agtgccatctatctggcgctggttgtggccgtaggctggatctttatccgcatgccaacc
gccttcttgccggacgaagatcagggcattctgtttacccaggcgattctgccaaccaac
gccactcaggaaagtaccctgaaggtattggagaaggtctcggatcaattcctggcagac
gaaaacgtcaaatcagttctgagtgtggcaggcttcagtttcgccggtcagggtcagaac
atgggtatcgccttcgttggactgaaagactggtctgagcgtactgctcctggcagtgat
gttcaggcggttgccggccgcgccatggcggtgttcagccagatgaaagaagcctttgtg
tttgccttcgtaccacctgcggtaattgagctggggacggccaacggttttgacctcttc
ctgcaggataagaatggtcaaggacatgaaaagctggttcaggcccgtaaccaactgctg
ggcatggcggctcagaatcccaacctggtgggtgtacgccccaatggtcaggaagatgcg
cccatgtatcagctacacatagatcatgccaagctgcgtgcgctgagtgtcaacataggt
gatgtcaacaacgtgctttctgccgcttggggtggctcctatgtcaatgacttcatcgac
cgtggtcgggtgaagaaggtttatgttcaagccgatgccaagtatcggatgcaacctgaa
gatctggactcctggtatgtgcgtaacacccagggagacatggtgcccttctcagccttt
gccaccggcagctgggagtatggttcaccacgtctggaacgcttcaacggcctgccggcg
atgaatatccagggtgcgacggttccaggcttcagtaccggtgaagcgatgaacatcatg
gaaggcatggttgaccaactgcctccaggctttggtatcgaatggaacggcctctcctat
gaggaacgtctgtcaggcaaccaggcgcctgcgctctacgcgctgtcgattctggtggta
ttcctggtactggcggccctgtatgaaagctggtctgtgcctttcgcggtaattctggtg
gtgcctctgggtattatcggtgccctgatcgccatgaatggccgcggcctgccaaacgac
gtgttcttccaagtgggtctgttgactactgtgggcctggcaaccaagaacgccattctg
atcgtggaattcgccaaggaatactatgagcagggtgccaagctgattgacgcgacactg
cacgcggtgcgggtacgtctgcggccaattctgatgacctcgctggcattcggcctcggg
gttgtgccactggccgtcagtaccggcgtgggttcaggcagtcagaacgccattggtacc
ggggtactgggcggtatgatcagctcgaccttcctgggtatcttctttatcccactcttc
ttcgtggtggtagagcgcatgttcagtaagcgtgagcgtgaagagcgtaaactgcgaaga
caggccaaataa
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