Sinorhizobium chiapasense: RB548_12540
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Entry
RB548_12540 CDS
T11111
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
schp Sinorhizobium chiapasense
Pathway
schp00300
Lysine biosynthesis
schp00550
Peptidoglycan biosynthesis
schp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
schp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RB548_12540
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RB548_12540
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
schp01011
]
RB548_12540
Enzymes [BR:
schp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
RB548_12540
Peptidoglycan biosynthesis and degradation proteins [BR:
schp01011
]
Precursor biosynthesis
Amino acid ligase
RB548_12540
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
YqeC
Motif
Other DBs
NCBI-ProteinID:
WVT05880
UniProt:
A0ABZ2BH41
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All DBs
Position
complement(2577299..2578759)
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AA seq
486 aa
AA seq
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MKIKDLAGAAFPELSAQLKGVSSDIEIAGITADSRQVKPGDLFVAVAGTKANGTAYIADA
LSRGAAAVVAADSTDTGADVPVFGLSEPRRFLAKAAAAFYGRQPETMVAVTGTAGKTSVA
SFTRQIWAHSGLAAAMIGTTGVVAPGRNDYGSLTTPDPVSLHKLLKELADAGVTHAAMEA
SSHGLDQSRLDGVRLAAAAFTNLGRDHMDYHPTVEHYMASKMRLFSTLLPKGAPAVIFAD
DQWSDQAIAAARKAGQDVRTVGRKGEFLTLKRVEHFRHKQSAEVHVGDDIFEIHVPLAGD
FQIANALVAAGLAMSTGISAKAAFSALEKLQGASGRLELVGHTKDGALAYVDYAHKPDAL
ENVLTSVRPFTTGRIIVVFGCGGDRDKGKRPIMGEIATRLADVVIVTDDNPRSEVPEVIR
AEIMATAKGATEIGDRAEAIRTAVGMLKSGDTLIVAGKGHEEGQTIGSVTLPFSDHEEVR
KALGGL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaaggacctggcgggagcagctttcccggaactttcggcgcaactgaagggc
gtttcctcggatatcgagatcgccggcattacggccgatagccggcaggtcaaaccgggc
gatcttttcgtcgctgtcgccgggacgaaggcgaatgggaccgcctacatcgctgatgcc
ctttcgcgcggcgctgcggccgtggtcgcggcggatagcacggataccggggccgacgtg
ccggtgttcgggctctcggagccgcgacgtttcctggcgaaggcggccgccgccttctat
gggcgccaaccggagaccatggtggcggtgaccgggacggcgggcaagacctccgtcgct
tccttcacccggcagatctgggcgcattcgggccttgccgccgcgatgatcggaacgacc
ggcgtcgtggcgccgggccgcaacgactacggatcgctgaccaccccggacccggtttcg
ctgcacaagctgcttaaggaactcgctgatgccggcgtgacccatgcggcgatggaagcc
tccagccacggcctcgaccagagccggctcgacggcgttcggcttgccgccgcggccttc
accaatctcggccgcgaccacatggactatcatccgacggtcgaacactacatggcctcg
aagatgcgcctcttctcgaccctcctgcccaagggcgcaccggcggtgatcttcgccgac
gaccaatggtctgaccaggcgatcgccgccgcccgcaaggccggccaggatgtgcgcact
gttggacgcaagggcgaattcctcacgttgaagcgcgtcgagcatttccgccacaagcag
tcggcggaggtccatgtcggtgacgatattttcgagatccacgtgccgcttgccggcgac
ttccagattgccaatgcgctggttgccgccggccttgccatgtccaccggcatcagcgcc
aaggcggccttttcggcgctcgagaaattgcagggcgcgtccgggcgcctcgaactcgtc
gggcacacgaaggatggcgcgctcgcctatgtggattatgcccacaagccggacgcgctg
gagaatgtcctgacctcggttcgtcctttcaccaccggccggatcattgtcgttttcggc
tgcggcggcgaccgcgacaagggtaagcggccgattatgggcgagatcgccacgcggctt
gccgatgtggtcatcgtcaccgacgacaacccgcgctcggaagtgccggaagttatccgc
gccgagatcatggccacggccaagggcgcaaccgaaatcggcgaccgcgccgaggcgatc
cgcacggcggtcggcatgctgaaaagcggcgacacgctgatcgtcgccggcaagggacat
gaggaagggcagacgatcggttccgtgaccctgccgttctcggaccacgaggaagtacgc
aaggcattgggagggctatga
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