Sinorhizobium chiapasense: RB548_19390
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Entry
RB548_19390 CDS
T11111
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
schp Sinorhizobium chiapasense
Pathway
schp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
schp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RB548_19390 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
schp03400
]
RB548_19390 (nth)
Enzymes [BR:
schp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
RB548_19390 (nth)
DNA repair and recombination proteins [BR:
schp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RB548_19390 (nth)
Prokaryotic type
RB548_19390 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WVT03609
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All DBs
Position
4090432..4091208
Genome browser
AA seq
258 aa
AA seq
DB search
MKNVKLKTPKQPSKSNATTARLARARQRSAYGAAEIEEIFRRFSVQRPEPRGELEHVNPF
TLVVAVALSAQATDAGVNKATRALFAVADTPQKMLALGEEKLRDYIKTIGLYRNKAKNVI
ALSEKLIADFGGEVPRTREELVTLPGVGRKTANVVLSMAFGQPTIAVDTHIFRIANRILL
APGRTPDEVEAHLLRVIPEAYLYHAHHWLILHGRYVCKARRPECERCVIADLCKSPEKTC
DIPAPLIELPPQVVPVAG
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacgtgaagctgaaaacgccgaagcaaccgtcaaaatcgaacgcaacgacagcc
cgcttggcccgggcgcggcaacgcagtgcctacggcgctgccgagatcgaggagatcttc
cgtcgcttctccgtgcagcgccccgagccgaggggcgaactcgaacacgtcaacccgttc
acgctggtggtggcggtcgcgctttcggcccaggcaaccgacgccggcgtcaacaaggcg
acgcgggcgctctttgccgtcgccgatacgccgcaaaagatgctggcgttgggtgaggag
aagcttcgggactatatcaagacgatcggactttaccgcaacaaggcgaaaaacgtcatc
gcgctctcggaaaaactgatcgccgatttcggcggtgaggtaccccgcacgcgggaagaa
ctggtgaccctgccgggcgtcgggcgcaagaccgccaatgtcgtcttgtccatggctttc
ggccagccgacgatcgccgtcgacacccatatcttccgcatcgccaatcgcattcttctc
gcgccgggcaggacgccggacgaagtggaggctcatctgctgcgcgtcatcccggaggcc
tatctttaccacgcccaccattggctgatcctgcacggccgctacgtttgcaaggcgcgc
cgaccggaatgcgagcgctgtgtcatcgcagacctctgcaagtcaccggaaaaaacttgc
gatataccggccccattgatcgagctgccgccgcaggtcgtgcccgtcgccggttga
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