Sinorhizobium chiapasense: RB548_23430
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Entry
RB548_23430 CDS
T11111
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
schp Sinorhizobium chiapasense
Pathway
schp01501
beta-Lactam resistance
schp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
schp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RB548_23430
01503 Cationic antimicrobial peptide (CAMP) resistance
RB548_23430
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
schp02000
]
RB548_23430
01504 Antimicrobial resistance genes [BR:
schp01504
]
RB548_23430
Transporters [BR:
schp02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RB548_23430
Antimicrobial resistance genes [BR:
schp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RB548_23430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
RSLD_CPSF6
Spore_YhcN_YlaJ
Motif
Other DBs
NCBI-ProteinID:
WVT06653
UniProt:
A0ABZ2BIU4
LinkDB
All DBs
Position
pSchITTGS70c:complement(150860..154000)
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AA seq
1046 aa
AA seq
DB search
MNFSAWSILNPIPAILLFAMLTIGGILAFERLPIQYFPDMDLPRIDITATLEGAAPAQLE
TEVARIIEDRVASLNHLDHIATTITDGTVSLSATFELEKNTDEALNEVRNAVDSAKGDLP
AKMQTPSVTKVTLQSAALVTYAVRSSHLSETELSWFIDNDMTKTLLSVPGVGQVNRSGGI
DREVHVDLDPATMASLGVTAATVSEQLKSVQADTSGGLGEIGGARQTLRTLGAVASVEDL
KGLQIPLPNGQQVRLDDVASVTDSFADRSSLAYLDGQPVIAVAIKRSNGFSDTGVAADVD
EAVAQFAAKHPDVQIDKVYSTVGAVLENYHGSMHMLYEGAILAVVVVWLFLRDWRATILS
AVTLPLSVVPTFLLMYAADFSLNVITLLALSLVVGILVDDAIVEIENIARHLQMGKRPID
AALEAANEIWLAVVATTLTLVAVFVPTAFMGGISGLLFRQFGITAAVAVLASLIVARLLT
PMMAAYFMKPHSTQQKDGRIMRAYMAIVKASLKHRKKTLLVTAVFVALSLSTIPFLKSGF
LPAADDARTRVTLTQQPGATIDQMDTTARKAADIVSKLRDVTHVFSSVGSASSGDGPQIS
IGTATLDVMLTPINERDRKQSEIEKDIRSALSVLPGVRVAVDNGGHGTQLVITLASDDSN
ALGEATNALEEQLRTLNGIGAVTSTASRQAPEVQITPDFVSAAALGVTSSAIAEAVRVAT
RGDYSSALPKLNLPQRQIPIVVRFKPEARTNLDDIRNIRVPGTHGSVDLGSIADIRIGGS
PSEIDRIDQMRNMTLSVELNGRILGDVYREAKALPALEHLPAGVTLVKQGELQRSSELFQ
SFALAMAIGVFCIYAVLVLLFHDFLQPFTILMALPLSLGGALLPLVVTGTSFSMPVVIGL
LMLMGVVTKNSILLVEYAIMSRRQGMSRFDALVDACRKRGRPIVMTTIAMASGMLPVALS
LTGGDSSFRRPMAIVVIGGVMTSTLLSLIVIPIIFTFVDDLLEALKRLGRRTQARNEIAG
QETDAFNNYEPIAFKPSSAARGHGQS
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgaatttctccgcctggtcgattctcaatcccataccggcgatactgctcttcgcaatg
ctcacgatcggtgggatattggctttcgaacgcctgccgatccaatacttcccggacatg
gaccttccgaggatcgacatcaccgcgacccttgagggcgcggcgccggcgcagctcgag
acggaggttgcccgcataatcgaggaccgggtggcctcgttgaaccatctcgaccacatc
gccacaacgatcaccgacggaaccgtctcactcagcgccaccttcgagctggagaagaac
accgatgaagccttgaacgaggtccgcaatgctgtcgacagtgcaaagggggatctgccg
gcgaagatgcagacgccgagcgtcaccaaagtcaccctgcagagcgccgcgctggtcacc
tacgcggtccgttcgtcccatcttagcgagacagagctttcctggtttatcgacaacgat
atgacgaagacgcttctatcggtaccgggagtgggacaggtgaaccgatcgggcggcatc
gatcgcgaggttcatgtcgacctcgatccggcgacgatggcatcgctcggggtcactgca
gcgactgtttcagaacagttgaagtcggtccaggctgatacgtcgggtgggcttggagaa
atcggcggggcccgccagacgctgcggacgctcggcgccgtcgcatccgtcgaagacctc
aagggactgcaaattccgctgcccaacggccagcaagtccgtcttgacgatgtcgcttcc
gtcactgacagcttcgcggaccggtcgtcgcttgcctatctcgacggccagcccgtgatc
gctgtcgcgatcaaacgctcgaacgggttctcggacaccggcgttgccgccgacgtcgac
gaggcggtagcacagttcgccgccaaacatcccgacgtgcagatcgataaagtctacagc
accgtcggggcagtcctcgagaactatcatggttcgatgcacatgctgtacgagggggcg
atcctcgccgtcgtggtggtctggctcttcctgcgggattggcgcgcgacgatcttgtcg
gccgtgacgctgccattgtcggtcgtaccgaccttcctcttaatgtacgccgctgacttc
agcctcaatgtcatcactctgcttgcactgtcgctggtggtcggcattcttgtcgacgat
gccatcgtggagatcgaaaacatcgcccgccacctccagatgggcaaacgaccgattgat
gcagccctcgaagcggccaatgagatctggttagcggttgtcgcgaccacgctcacgctc
gtcgcggtctttgtgccgacggcattcatgggcggcatatcagggctgctcttccggcag
ttcggcatcaccgccgcagtcgccgtactcgcctcgctgatcgttgcgcgcctgctaacg
ccgatgatggccgcctatttcatgaagccgcattccacccagcaaaaggatgggcgaatc
atgcgtgcatacatggcgattgtgaaggcgtctttgaagcacaggaagaaaacgctcctc
gtgaccgcggtcttcgtcgcactctcgctttccaccatcccgttcctgaaatcgggcttc
ctgccggctgccgacgacgcgcggacccgggtgacgctgacccagcagcccggagccaca
atcgatcagatggacacaacggccaggaaggcggcggacatcgtaagcaagctgcgcgat
gtgacgcatgtcttctcgtcggtcggttctgcatcatcgggtgatggcccgcagatcagt
attggaacagccacgctcgacgtcatgctgacgcccattaacgaacgagaccgcaagcag
tcagagatcgaaaaggatatccgctcggccctctcggtgctccccggcgtgcgggttgcg
gtcgacaacggtggccacggcacgcagctcgtcatcacccttgcaagcgacgactccaat
gcccttggcgaagcaaccaatgcgcttgaggagcaactccgaacgctcaatgggatcgga
gcggtgacttcgaccgcttcgaggcaggcgcccgaggttcagatcaccccggactttgtg
agcgcagccgcactcggggtgacgtcaagcgccatcgcggaagccgtgcgcgttgcgacg
cgtggagactactcttccgccctgccaaagctcaatctgcctcagcggcaaatccccatc
gtcgtccgcttcaagcccgaggcacgcacaaatctcgacgacatcaggaacataagggtg
cccggaacccatggcagcgtcgatcttggatcaatcgccgacatacgtatcggcggaagt
ccttccgagatcgatcgcatcgatcaaatgcgcaatatgactctttcggtcgagctcaac
ggccgtatcctgggcgacgtctatcgcgaggcaaaggcgctgccggctcttgagcacctg
ccggcgggcgtcacgctcgtgaagcaaggcgaacttcagcgcagttcggaactgttccaa
agcttcgctcttgcaatggcgatcggcgtgttctgcatctatgcagtgctcgtcctgctc
ttccacgacttcctgcaaccgttcaccatcctcatggcccttccgctttcgctcggaggc
gcactgctgccactagtggtgaccggaaccagcttctcgatgccggtggtcatcgggctg
ctgatgctcatgggcgtggtgacgaagaactcgatccttctagtcgaatacgcgatcatg
tcgcgccgccagggaatgtcgcggttcgatgcactcgtcgatgcctgccgcaagcgcggg
cgtcccattgtcatgacaaccatcgccatggcatcgggcatgctcccggttgctttgagc
ctgacggggggcgattcaagtttccgacggccgatggccattgtggtgatcggcggtgta
atgacgtcaacgctactcagccttattgtcatccccatcatcttcacgttcgtcgatgac
ctgcttgaggcactgaaacggctcggacgccggacgcaggcacgcaacgagatcgccggg
caggagacggatgcattcaacaattacgagccgattgccttcaaacctagctccgcggct
cgaggacatggccagagctga
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